RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 FADS3Q9Y5Q0 445 aa14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 OAS3Q9Y6K5 1087 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 ZNF106Q9H2Y7 1883 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-213ENST00000580446 MED13LQ71F56 2210 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 IGHV5-10-1A0A0J9YXX1 117 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 SMAD6O43541 496 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 SNAP91O60641 907 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 LEFTY1O75610 366 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 RFPL1O75677 317 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 SORBS2O94875 1100 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 SRCP12931 536 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 EIF4A3P38919 411 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 COPB1P53618 953 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 ARHGEF7Q14155 803 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 ERV3-1Q14264 604 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 LRRC73Q5JTD7 316 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 NKAIN2Q5VXU1 208 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 KIAA1161Q6NSJ0 714 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 MSANTD2Q6P1R3 559 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 KDELC2Q7Z4H8 507 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 SLC4A11Q8NBS3 891 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 RNF34Q969K3 372 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 ALG14Q96F25 216 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 FEM1CQ96JP0 617 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 CLIC6Q96NY7 704 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 DDX50Q9BQ39 737 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 HDAC8Q9BY41 377 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 TRIM55Q9BYV6 548 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 EDEM3Q9BZQ6 932 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 CYP4F12Q9HCS2 524 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 SLC5A6Q9Y289 635 aa14.32□□□□□ -0.12
CSNK1D-213ENST00000580446 CROCCQ5TZA2 2017 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 CAPN5O15484 640 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 GABBR2O75899 941 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 ADRB3P13945 408 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 NEK3P51956 506 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 DAOAP59103 153 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 NUCB2P80303 420 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 SULT2A1Q06520 285 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 ELOCQ15369 112 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 ZACNQ401N2 412 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 SP5Q6BEB4 398 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 LINGO4Q6UY18 593 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 MACC1Q6ZN28 852 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 STXBP4Q6ZWJ1 553 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 CENPQQ7L2Z9 268 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 PARS2Q7L3T8 475 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 EPM2AIP1Q7L775 607 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 PIM3Q86V86 326 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 CCDC65Q8IXS2 484 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 NLGN4XQ8N0W4 816 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 SLC34A3Q8N130 599 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 FSTL5Q8N475 847 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 ATP11CQ8NB49 1132 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 TTC13Q8NBP0 860 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 GPR156Q8NFN8 814 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 NLGN4YQ8NFZ3 816 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 NANOS1Q8WY41 292 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 LURAP1Q96LR2 239 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 C1QTNF2Q9BXJ5 285 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 INTS2Q9H0H0 1204 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 TMEM9Q9P0T7 183 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 RCOR3Q9P2K3 495 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 CCDC39Q9UFE4 941 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 VPS28Q9UK41 221 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 APPL1Q9UKG1 709 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 LIMCH1Q9UPQ0 1083 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 ENTPD4Q9Y227 616 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 KCTD3Q9Y597 815 aa14.31□□□□□ -0.12
CSNK1D-213ENST00000580446 M0QYT0 321 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 ALPIP09923 528 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 GLB1P16278 677 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 ALDH4A1P30038 563 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 GGCXP38435 758 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 ABL2P42684 1182 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 HK3P52790 923 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 RAD23BP54727 409 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 MAZP56270 477 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 B4GALNT1Q00973 533 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 ANKRD52Q8NB46 1076 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 ZNF507Q8TCN5 953 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 DQX1Q8TE96 717 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 IRX2Q9BZI1 471 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 UBXN6Q9BZV1 441 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 B3GNT4Q9C0J1 378 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 MMRN2Q9H8L6 949 aa14.3□□□□□ -0.12
CSNK1D-213ENST00000580446 UNC13CQ8NB66 2214 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 CDC14CA4D256 554 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 XPO1O14980 1071 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 CPNE6O95741 557 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 PRNPP04156 253 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 RPN1P04843 607 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 SNRPB2P08579 225 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 PDCP20941 246 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 STAT6P42226 847 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 ANAPC15P60006 121 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 CLDN10P78369 228 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 CHAF1BQ13112 559 aa14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 ZC3H12AQ5D1E8 599 aaKnown RBP14.29□□□□□ -0.12
CSNK1D-213ENST00000580446 C1orf220Q5T0J3 134 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms