RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 TYRO3Q06418 890 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 CYP4F3Q08477 520 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 POLD3Q15054 466 aaPredicted RBP18.63■□□□□ 0.57
USB1-213ENST00000566292 PPP1R15BQ5SWA1 713 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 KIAA1161Q6NSJ0 714 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 DNAJC24Q6P3W2 148 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 FBXL19Q6PCT2 694 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 BAP1Q92560 729 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 BMFQ96LC9 184 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 MCEEQ96PE7 176 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 CALN1Q9BXU9 219 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 SLC17A9Q9BYT1 436 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 KLHL11Q9NVR0 708 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 LHX6Q9UPM6 363 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 GPSM3Q9Y4H4 160 aa18.63■□□□□ 0.57
USB1-213ENST00000566292 URB1O60287 2271 aaKnown RBP18.63■□□□□ 0.57
USB1-213ENST00000566292 LRRK1Q38SD2 2015 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 CACNA1GO43497 2377 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 RAD51BO15315 384 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 KDELR3O43731 214 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 AP1G1O43747 822 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 GSRP00390 522 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 DGKAP23743 735 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 GEMIN4P57678 1058 aaKnown RBP18.62■□□□□ 0.57
USB1-213ENST00000566292 RPS21P63220 83 aaKnown RBP18.62■□□□□ 0.57
USB1-213ENST00000566292 MAPK8IP2Q13387 824 aaPredicted RBP18.62■□□□□ 0.57
USB1-213ENST00000566292 PROX2Q3B8N5 592 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 EFHC2Q5JST6 749 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 SCYL2Q6P3W7 929 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 IRF2BP2Q7Z5L9 587 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 MCOLN2Q8IZK6 566 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 RYBPQ8N488 228 aaPredicted RBP18.62■□□□□ 0.57
USB1-213ENST00000566292 PDCD7Q8N8D1 485 aaKnown RBP18.62■□□□□ 0.57
USB1-213ENST00000566292 RTL3Q8N8U3 475 aaKnown RBP18.62■□□□□ 0.57
USB1-213ENST00000566292 OR2AP1Q8NGE2 309 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 FEM1CQ96JP0 617 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 SYT11Q9BT88 431 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 KLC2Q9H0B6 622 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 GPR27Q9NS67 375 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 UCKL1Q9NWZ5 548 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 TAS2R14Q9NYV8 317 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 GGT7Q9UJ14 662 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 HPCAL4Q9UM19 191 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 RAXQ9Y2V3 346 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 HS3ST3A1Q9Y663 406 aa18.62■□□□□ 0.57
USB1-213ENST00000566292 POM121BA6NF01 834 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 C16orf96A6NNT2 1141 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 SPINT1O43278 529 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 SIGLEC6O43699 453 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 MBD3O95983 291 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 PAK4O96013 591 aaPredicted RBP18.61■□□□□ 0.57
USB1-213ENST00000566292 CDK4P11802 303 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 FERP16591 822 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 CKMT2P17540 419 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 EPHB2P29323 1055 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 SNRPD1P62314 119 aaKnown RBP18.61■□□□□ 0.57
USB1-213ENST00000566292 OGDHQ02218 1023 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 ZNF805Q5CZA5 627 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 ATXN7L2Q5T6C5 722 aaPredicted RBP18.61■□□□□ 0.57
USB1-213ENST00000566292 ACAD10Q6JQN1 1059 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 Q6ZSR6 202 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 NETO2Q8NC67 525 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 LRIG1Q96JA1 1093 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 CNPY3Q9BT09 278 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 FZD10Q9ULW2 581 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 ITM2BQ9Y287 266 aa18.61■□□□□ 0.57
USB1-213ENST00000566292 A6NNZ2 444 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 KRIT1O00522 736 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 BUB1O43683 1085 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 PIAS2O75928 621 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 TMCC1O94876 653 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 UGT2B4P06133 528 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 GIMD1P0DJR0 217 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 JUPP14923 745 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 ACP1P24666 158 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 ZNF211Q13398 564 aaPredicted RBP18.6■□□□□ 0.57
USB1-213ENST00000566292 MYLK3Q32MK0 819 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 ANO6Q4KMQ2 910 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 HES3Q5TGS1 186 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 C19orf48Q6RUI8 117 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 KYAT3Q6YP21 454 aaKnown RBP18.6■□□□□ 0.57
USB1-213ENST00000566292 PTAR1Q7Z6K3 402 aaPredicted RBP18.6■□□□□ 0.57
USB1-213ENST00000566292 FAM174AQ8TBP5 190 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 RAB7BQ96AH8 199 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 HMCESQ96FZ2 354 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 KLHL32Q96NJ5 620 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 KLF6Q99612 283 aaPredicted RBP18.6■□□□□ 0.57
USB1-213ENST00000566292 C1QTNF2Q9BXJ5 285 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 ANKRD36A6QL64 1941 aa18.6■□□□□ 0.57
USB1-213ENST00000566292 ANKRD62A6NC57 917 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 ZSCAN5CA6NGD5 496 aaPredicted RBP18.59■□□□□ 0.57
USB1-213ENST00000566292 IGLON5A6NGN9 336 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 WASH4PA8MWX3 477 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 RASA4BC9J798 803 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 RASA4O43374 803 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 TSPAN6O43657 245 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 CREB3O43889 395 aa18.59■□□□□ 0.57
USB1-213ENST00000566292 POP4O95707 220 aaKnown RBP18.59■□□□□ 0.57
USB1-213ENST00000566292 HNF1BP35680 557 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms