RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 FADS3Q9Y5Q0 445 aa13.58□□□□□ -0.24
HACD3-208ENST00000566239 HS3ST3A1Q9Y663 406 aa13.58□□□□□ -0.24
HACD3-208ENST00000566239 KNTC1P50748 2209 aa13.58□□□□□ -0.24
HACD3-208ENST00000566239 SIGLEC16A6NMB1 481 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 LGALS16A8MUM7 142 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 FAM72CH0Y354 149 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 KRIT1O00522 736 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 NEMP1O14524 444 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 FPGTO14772 594 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 TSPAN6O43657 245 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 SIGLEC6O43699 453 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 PIAS2O75928 621 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 GJB6O95452 261 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 CD160O95971 181 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 PAK4O96013 591 aaPredicted RBP13.57□□□□□ -0.24
HACD3-208ENST00000566239 GSRP00390 522 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 CCDC172P0C7W6 258 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 HDAC4P56524 1084 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 CLDN2P57739 230 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 E2F1Q01094 437 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 PTP4A2Q12974 167 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 TARDBPQ13148 414 aaKnown RBP eCLIP13.57□□□□□ -0.24
HACD3-208ENST00000566239 SGCGQ13326 291 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 PROX2Q3B8N5 592 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 ZNF805Q5CZA5 627 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 EFHC2Q5JST6 749 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 FAM72AQ5TYM5 149 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 FAM72DQ6L9T8 149 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 WDR59Q6PJI9 974 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 Q6ZSR6 202 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 FAM72BQ86X60 149 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 SLC25A45Q8N413 288 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 PCDHB18PQ96TA0 734 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 OSBPL1AQ9BXW6 950 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 NRSN2Q9GZP1 204 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 EVA1BQ9NVM1 165 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 ACTL7AQ9Y615 435 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 AK5Q9Y6K8 562 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 SHROOM3Q8TF72 1996 aa13.57□□□□□ -0.24
HACD3-208ENST00000566239 C16orf96A6NNT2 1141 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 H3BM21 787 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 TRIM38O00635 465 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 FFAR2O15552 330 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 KDELR3O43731 214 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 POP4O95707 220 aaKnown RBP13.56□□□□□ -0.24
HACD3-208ENST00000566239 RABIFP47224 123 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 AIF1P55008 147 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 HNRNPKP61978 463 aaKnown RBP eCLIP13.56□□□□□ -0.24
HACD3-208ENST00000566239 RAD51Q06609 339 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
HACD3-208ENST00000566239 DNAJC24Q6P3W2 148 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 SCYL2Q6P3W7 929 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 KYAT3Q6YP21 454 aaKnown RBP13.56□□□□□ -0.24
HACD3-208ENST00000566239 PDZD3Q86UT5 571 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 SLC22A18ASQ8N1D0 253 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 CACTIN-AS1Q8N1I8 211 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 OR6K2Q8NGY2 324 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 CASKIN2Q8WXE0 1202 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 RFFLQ8WZ73 363 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 GDAP1L1Q96MZ0 367 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 ERGIC2Q96RQ1 377 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 AGPAT1Q99943 283 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 CATSPERBQ9H7T0 1116 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 UCKL1Q9NWZ5 548 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 DNAJC28Q9NX36 388 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 NLGN3Q9NZ94 848 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 IPO11Q9UI26 975 aaKnown RBP13.56□□□□□ -0.24
HACD3-208ENST00000566239 NEU3Q9UQ49 428 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 CLCA2Q9UQC9 943 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 ITPR1Q14643 2758 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 FREM2Q5SZK8 3169 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 URB1O60287 2271 aaKnown RBP13.56□□□□□ -0.24
HACD3-208ENST00000566239 APC2O95996 2303 aa13.56□□□□□ -0.24
HACD3-208ENST00000566239 A0A087WV48 116 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 LRRC10BA6NIK2 292 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 CCP110O43303 1012 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 BUB1O43683 1085 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 IGSF6O95976 241 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 UGT2B4P06133 528 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 FERP16591 822 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 EPHB2P29323 1055 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 DUSP3P51452 185 aaPredicted RBP13.55□□□□□ -0.24
HACD3-208ENST00000566239 ZNF143P52747 638 aaPredicted RBP13.55□□□□□ -0.24
HACD3-208ENST00000566239 CLDN6P56747 220 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 YBEYP58557 167 aaPredicted RBP13.55□□□□□ -0.24
HACD3-208ENST00000566239 MYLK3Q32MK0 819 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 PPP1R2P3Q6NXS1 205 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 MON1BQ7L1V2 547 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 PARGQ86W56 976 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 RTL3Q8N8U3 475 aaKnown RBP13.55□□□□□ -0.24
HACD3-208ENST00000566239 ASB12Q8WXK4 309 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 BMFQ96LC9 184 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 MCEEQ96PE7 176 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 LENG8Q96PV6 779 aaPredicted RBP13.55□□□□□ -0.24
HACD3-208ENST00000566239 EPAS1Q99814 870 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 DUSP23Q9BVJ7 150 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 MAGEB5Q9BZ81 275 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 NBEAQ8NFP9 2946 aa13.55□□□□□ -0.24
HACD3-208ENST00000566239 SPTY2D1-AS1A0A0U1RR47 76 aa13.54□□□□□ -0.24
HACD3-208ENST00000566239 POM121BA6NF01 834 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms