RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 NRDE2Q9H7Z3 1164 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 TMEM216Q9P0N5 145 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 ARHGEF28Q8N1W1 1705 aaKnown RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 KDM4FA0A1W2PPD8 638 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 H3BQF6 201 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 IL12RB1P42701 662 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 TCEAL5Q5H9L2 206 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 ZFP1Q6P2D0 407 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 ADHFE1Q8IWW8 467 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 NKAPQ8N5F7 415 aaKnown RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 BHLHE22Q8NFJ8 381 aaPredicted RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 SLC4A5Q9BY07 1137 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 OXCT2Q9BYC2 517 aaPredicted RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 ANKZF1Q9H8Y5 726 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 ELL3Q9HB65 397 aaPredicted RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 SH3GLB1Q9Y371 365 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 LOC100506127A0A0U1RQW1 187 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 C1QTNF3-AMACRE9PGA6 284 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 CTNNB1P35222 781 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 RPA3P35244 121 aaPredicted RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 RPL4P36578 427 aaKnown RBP13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 KRT74Q7RTS7 529 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 FAM220AQ7Z4H9 259 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 PROSER1Q86XN7 944 aa13.75□□□□□ -0.21
CX3CL1-204ENST00000565912 PNMA8CA0A1B0GUJ8 204 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 IL1BP01584 269 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 WARSP23381 471 aaKnown RBP13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 CCL23P55773 120 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 NTRK3Q16288 839 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 EARS2Q5JPH6 523 aaKnown RBP13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 PRAMEF19Q5SWL8 479 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 ETNPPLQ8TBG4 499 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 OMA1Q96E52 524 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 PCDH12Q9NPG4 1184 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 TOR4AQ9NXH8 423 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 HES2Q9Y543 173 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 MRPS22P82650 360 aaKnown RBP13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 ZNF844Q08AG5 666 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 ALG11Q2TAA5 492 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 CHPFQ8IZ52 775 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 ZCCHC9Q8N567 271 aaKnown RBP13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 ZFP28Q8NHY6 868 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 ATL1Q8WXF7 558 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 COPS5Q92905 334 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 TRAPPC9Q96Q05 1148 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 GSTK1Q9Y2Q3 226 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 BCL9O00512 1426 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 PDE9AO76083 593 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 MFN2O95140 757 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 HOXC6P09630 235 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 ALADP13716 330 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 CDC42P60953 191 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 NDUFA5Q16718 116 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 PACS1Q6VY07 963 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 NARS2Q96I59 477 aaKnown RBP13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 ATP13A3Q9H7F0 1226 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 COL3A1P02461 1466 aaPredicted RBP13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 KPNA4O00629 521 aaPredicted RBP13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 RECQL5O94762 991 aaPredicted RBP13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 PRG2P13727 222 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 NPR3P17342 541 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 PTPRAP18433 802 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 KATNAL2Q8IYT4 538 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 GPR156Q8NFN8 814 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 ZFP14Q9HCL3 533 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 NR2E3Q9Y5X4 410 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 NWD1Q149M9 1564 aa13.74□□□□□ -0.21
CX3CL1-204ENST00000565912 ECDO95905 644 aaPredicted RBP13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 ABRQ12979 859 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 NRF1Q16656 503 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 UNC5AQ6ZN44 842 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 FAM183BPQ6ZVS7 135 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 PARGQ86W56 976 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 KIAA0319LQ8IZA0 1049 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 HDAC7Q8WUI4 952 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 RERGQ96A58 199 aaPredicted RBP13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 TNFSF13BQ9Y275 285 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 A0A0A0MRY4 1105 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 HNMTP50135 292 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 GPC2Q8N158 579 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 MAGEE2Q8TD90 523 aaPredicted RBP13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 SPATA13Q96N96 652 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 NDNQ99608 321 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 MYOCQ99972 504 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 NUAK2Q9H093 628 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 PORCNQ9H237 461 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 KCNQ5Q9NR82 932 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 SLC27A5Q9Y2P5 690 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 MYPNQ86TC9 1320 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 RCVRNP35243 200 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 SLC12A3P55017 1021 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 C8orf59Q8N0T1 100 aaPredicted RBP13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 HELQQ8TDG4 1101 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 UROC1Q96N76 676 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 RACGAP1Q9H0H5 632 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 DDX4Q9NQI0 724 aaKnown RBP13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 CMTM6Q9NX76 183 aa13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 MRPS7Q9Y2R9 242 aaKnown RBP13.73□□□□□ -0.21
CX3CL1-204ENST00000565912 AP3M1Q9Y2T2 418 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms