RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 IQCDQ96DY2 449 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 BICD1Q96G01 975 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 UROC1Q96N76 676 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 PLIN2Q99541 437 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 BAG1Q99933 345 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-240ENST00000556339 CLSTN3Q9BQT9 956 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 PAAF1Q9BRP4 392 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 DUSP26Q9BV47 211 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 KIFC3Q9BVG8 833 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 TARS2Q9BW92 718 aaKnown RBP4.2□□□□□ -1.74
ATXN3-240ENST00000556339 TSPYL1Q9H0U9 437 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 BHMT2Q9H2M3 363 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ZHX3Q9H4I2 956 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 KMT5AQ9NQR1 393 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 SLC38A7Q9NVC3 462 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 PSD3Q9NYI0 1048 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 CALCOCO1Q9P1Z2 691 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 EPS15L1Q9UBC2 864 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 CDH7Q9ULB5 785 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 NOX1Q9Y5S8 564 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 TPRP12270 2363 aaKnown RBP4.2□□□□□ -1.74
ATXN3-240ENST00000556339 PLXNA3P51805 1871 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ITIH6Q6UXX5 1313 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 SMIM28A0A1B0GU29 152 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 A0A1W2PR48 441 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CCDC151A5D8V7 595 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 PRR23AA6NEV1 266 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 AKR1B15C9JRZ8 316 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 E9PMD0 336 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 I3L4J1 428 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 PODXLO00592 558 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 SLC16A4O15374 487 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ADAM12O43184 909 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 N4BP1O75113 896 aaKnown RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ITGA10O75578 1167 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ZRANB2O95218 330 aaKnown RBP eCLIP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 SPDEFO95238 335 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ESRRBO95718 433 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CCDC175P0C221 793 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 MYL4P12829 197 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CDK11BP21127 795 aaKnown RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 FDXRP22570 491 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 TKTP29401 623 aaKnown RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CDC25AP30304 524 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CASQ1P31415 396 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 RPL9P32969 192 aaKnown RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 LSP1P33241 339 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 NBL1P41271 181 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 BRCC3P46736 316 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ID4P47928 161 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 NPTX2P47972 431 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CLCNKBP51801 687 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CSTF1Q05048 431 aaKnown RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 FOXI1Q12951 378 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 SQSTM1Q13501 440 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 POSTNQ15063 836 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 MLF2Q15773 248 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 TAF12Q16514 161 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CTXN3Q4LDR2 81 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 COLEC12Q5KU26 742 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 SPATA1Q5VX52 437 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ARMC6Q6NXE6 501 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CNNM4Q6P4Q7 775 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 TRIM65Q6PJ69 517 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 SHC4Q6S5L8 630 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 PARM1Q6UWI2 310 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 DSTYKQ6XUX3 929 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 SYT10Q6XYQ8 523 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 USP37Q86T82 979 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 C11orf74Q86VG3 221 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 KIF18BQ86Y91 864 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 TMTC1Q8IUR5 882 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CNGA4Q8IV77 575 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CCDC105Q8IYK2 499 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 KIAA2013Q8IYS2 634 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 MYCT1Q8N699 235 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CEP112Q8N8E3 955 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 OR14C36Q8NHC7 312 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ITFG1Q8TB96 612 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 FGF13Q92913 245 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 SECISBP2LQ93073 1101 aaKnown RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF707Q96C28 371 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CALML4Q96GE6 196 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 DRC1Q96MC2 740 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 NELL2Q99435 816 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ACO2Q99798 780 aaKnown RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 KXD1Q9BQD3 176 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 RPP25Q9BUL9 199 aaKnown RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 REXO4Q9GZR2 422 aaKnown RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 HSD3B7Q9H2F3 369 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 BRD9Q9H8M2 597 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ZFP14Q9HCL3 533 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ARHGEF3Q9NR81 526 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 RMND1Q9NWS8 449 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 HCFC1R1Q9NWW0 138 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 FBXO2Q9UK22 296 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 RAB23Q9ULC3 237 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 TNFSF13BQ9Y275 285 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 MRPS17Q9Y2R5 130 aaKnown RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 PPP2R2CQ9Y2T4 447 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms