RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 LRIG1Q96JA1 1093 aa24.86■■□□□ 1.57
PRKCH-216ENST00000555542 EDEM3Q9BZQ6 932 aa24.86■■□□□ 1.57
PRKCH-216ENST00000555542 DHX35Q9H5Z1 703 aaKnown RBP24.86■■□□□ 1.57
PRKCH-216ENST00000555542 GPATCH2LQ9NWQ4 482 aa24.86■■□□□ 1.57
PRKCH-216ENST00000555542 DONSONQ9NYP3 566 aa24.86■■□□□ 1.57
PRKCH-216ENST00000555542 CNOT8Q9UFF9 292 aaKnown RBP24.86■■□□□ 1.57
PRKCH-216ENST00000555542 PCSK1NQ9UHG2 260 aa24.86■■□□□ 1.57
PRKCH-216ENST00000555542 AP4E1Q9UPM8 1137 aa24.86■■□□□ 1.57
PRKCH-216ENST00000555542 RASA4BC9J798 803 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 RASA4O43374 803 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 TMCC1O94876 653 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 GZMAP12544 262 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 YBEYP58557 167 aaPredicted RBP24.85■■□□□ 1.57
PRKCH-216ENST00000555542 RPS21P63220 83 aaKnown RBP24.85■■□□□ 1.57
PRKCH-216ENST00000555542 FANCCQ00597 558 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 RAD51Q06609 339 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 PARP15Q460N3 678 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 ATXN7L2Q5T6C5 722 aaPredicted RBP24.85■■□□□ 1.57
PRKCH-216ENST00000555542 KIAA1161Q6NSJ0 714 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 EID2Q8N6I1 236 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 TRIM11Q96F44 468 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 FEM1CQ96JP0 617 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 GDAP1L1Q96MZ0 367 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 CALN1Q9BXU9 219 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 TOR4AQ9NXH8 423 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 MYO1AQ9UBC5 1043 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 ZMIZ1Q9ULJ6 1067 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 ZFR2Q9UPR6 939 aaKnown RBP24.85■■□□□ 1.57
PRKCH-216ENST00000555542 SCINQ9Y6U3 715 aa24.85■■□□□ 1.57
PRKCH-216ENST00000555542 DAPK3O43293 454 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 POP4O95707 220 aaKnown RBP24.84■■□□□ 1.57
PRKCH-216ENST00000555542 LDOC1O95751 146 aaPredicted RBP24.84■■□□□ 1.57
PRKCH-216ENST00000555542 IGSF6O95976 241 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 UGT2B4P06133 528 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 HTR7P34969 479 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 RHOAP61586 193 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 BNIP3Q12983 259 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 MYLK3Q32MK0 819 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 ZNF805Q5CZA5 627 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 TMEM145Q8NBT3 493 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 CASKIN2Q8WXE0 1202 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 CNDP2Q96KP4 475 aaKnown RBP24.84■■□□□ 1.57
PRKCH-216ENST00000555542 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.84■■□□□ 1.57
PRKCH-216ENST00000555542 OSBPL1AQ9BXW6 950 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 TTYH3Q9C0H2 523 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 NOL6Q9H6R4 1146 aaKnown RBP24.84■■□□□ 1.57
PRKCH-216ENST00000555542 FADS3Q9Y5Q0 445 aa24.84■■□□□ 1.57
PRKCH-216ENST00000555542 CACNA1BQ00975 2339 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 FAM221BA6H8Z2 402 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 C16orf96A6NNT2 1141 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 WASH4PA8MWX3 477 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 EEF2KO00418 725 aaKnown RBP24.83■■□□□ 1.57
PRKCH-216ENST00000555542 DDX3XO00571 662 aaKnown RBP eCLIP24.83■■□□□ 1.572e-15■■■■■ 68.5
PRKCH-216ENST00000555542 PRPSAP2O60256 369 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 SDC3O75056 442 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 PTMSP20962 102 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 RXRGP48443 463 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 UBASH3AP57075 661 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 CLDN2P57739 230 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 KDF1Q8NAX2 398 aaPredicted RBP24.83■■□□□ 1.57
PRKCH-216ENST00000555542 RAB7BQ96AH8 199 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 SLC17A9Q9BYT1 436 aa24.83■■□□□ 1.57
PRKCH-216ENST00000555542 COL5A1P20908 1838 aaPredicted RBP24.82■■□□□ 1.56
PRKCH-216ENST00000555542 TMEM191CA6NGB0 347 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 ENC1O14682 589 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 AP1G1O43747 822 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 MYBL1P10243 752 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 SGCGQ13326 291 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 SERINC3Q13530 473 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 TMEM259Q4ZIN3 620 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 FIGNQ5HY92 759 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 ERMARDQ5T6L9 678 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 PTAR1Q7Z6K3 402 aaPredicted RBP24.82■■□□□ 1.56
PRKCH-216ENST00000555542 VPS36Q86VN1 386 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 UMODL1-AS1Q8N2C9 162 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 NETO2Q8NC67 525 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 KLHL32Q96NJ5 620 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 NCAPGQ9BPX3 1015 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 SNRNP25Q9BV90 132 aaKnown RBP24.82■■□□□ 1.56
PRKCH-216ENST00000555542 TRPM6Q9BX84 2022 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 KLC2Q9H0B6 622 aa24.82■■□□□ 1.56
PRKCH-216ENST00000555542 MRPL47Q9HD33 250 aaKnown RBP24.82■■□□□ 1.56
PRKCH-216ENST00000555542 EPG5Q9HCE0 2579 aa24.81■■□□□ 1.56
PRKCH-216ENST00000555542 A6NNZ2 444 aa24.81■■□□□ 1.56
PRKCH-216ENST00000555542 EIF3CLB5ME19 914 aaKnown RBP24.81■■□□□ 1.56
PRKCH-216ENST00000555542 TSPAN6O43657 245 aa24.81■■□□□ 1.56
PRKCH-216ENST00000555542 PAK4O96013 591 aaPredicted RBP24.81■■□□□ 1.56
PRKCH-216ENST00000555542 INO80DQ53TQ3 878 aaPredicted RBP24.81■■□□□ 1.56
PRKCH-216ENST00000555542 PPP6R3Q5H9R7 873 aaPredicted RBP24.81■■□□□ 1.56
PRKCH-216ENST00000555542 GDPD4Q6W3E5 623 aa24.81■■□□□ 1.56
PRKCH-216ENST00000555542 ZSCAN30Q86W11 494 aa24.81■■□□□ 1.56
PRKCH-216ENST00000555542 GALNT15Q8N3T1 639 aa24.81■■□□□ 1.56
PRKCH-216ENST00000555542 OR13H1Q8NG92 308 aa24.81■■□□□ 1.56
PRKCH-216ENST00000555542 CPLX3Q8WVH0 158 aa24.81■■□□□ 1.56
PRKCH-216ENST00000555542 ARHGEF26Q96DR7 871 aa24.81■■□□□ 1.56
PRKCH-216ENST00000555542 CELF6Q96J87 481 aaKnown RBP24.81■■□□□ 1.56
PRKCH-216ENST00000555542 EIF3CQ99613 913 aaKnown RBP24.81■■□□□ 1.56
PRKCH-216ENST00000555542 UBA2Q9UBT2 640 aaPredicted RBP24.81■■□□□ 1.56
PRKCH-216ENST00000555542 PTPRBP23467 1997 aa24.81■■□□□ 1.56
PRKCH-216ENST00000555542 MIPP30301 263 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms