RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 C1QTNF3-AMACRE9PGA6 284 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 WNT9AO14904 365 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 SPINT1O43278 529 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 PIGNO95427 931 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 UGT2B4P06133 528 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 ZNF806P0C7X5 589 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 ITIH2P19823 946 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 ABL2P42684 1182 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 SLC1A1P43005 524 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 RECQLP46063 649 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-214ENST00000554928 GEMIN4P57678 1058 aaKnown RBP12.54□□□□□ -0.4
SYNE2-214ENST00000554928 GSDMDP57764 484 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 IRX4P78413 519 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 CCZ1BP86790 482 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 CCZ1P86791 482 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-214ENST00000554928 IL10RBQ08334 325 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 LRRC73Q5JTD7 316 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 SPDYCQ5MJ68 293 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 LRRC38Q5VT99 294 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 C11orf63Q6NUN7 778 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 LAYNQ6UX15 382 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 B4GALNT4Q76KP1 1039 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 DSG4Q86SJ6 1040 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 KIAA1328Q86T90 577 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 SYT12Q8IV01 421 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 RHOT1Q8IXI2 618 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 RGL4Q8IZJ4 473 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 ZCCHC9Q8N567 271 aaKnown RBP12.54□□□□□ -0.4
SYNE2-214ENST00000554928 LZTR1Q8N653 840 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 PLD5Q8N7P1 536 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 LRRC57Q8N9N7 239 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 CADM4Q8NFZ8 388 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 C1orf216Q8TAB5 229 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 DNASE2BQ8WZ79 361 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 SNX19Q92543 992 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 RNF157Q96PX1 679 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 HERPUD2Q9BSE4 406 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 MIR1-1HGQ9H1L0 117 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 SP110Q9HB58 689 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 SGK2Q9HBY8 427 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 EIF2B4Q9UI10 523 aaKnown RBP12.54□□□□□ -0.4
SYNE2-214ENST00000554928 GGT7Q9UJ14 662 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 FZD4Q9ULV1 537 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 SCML1Q9UN30 329 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 NCKAP1Q9Y2A7 1128 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-214ENST00000554928 ADGRG1Q9Y653 693 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 DMXL1Q9Y485 3027 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 CEP192Q8TEP8 1941 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 MACROD2A1Z1Q3 448 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 BTNL10A8MVZ5 291 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 PLRG1O43660 514 aaKnown RBP12.53□□□□□ -0.4
SYNE2-214ENST00000554928 PALMO75781 387 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 PRNPP04156 253 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 KRT10P13645 584 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 CDKN2BP42772 138 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 SNRPD1P62314 119 aaKnown RBP12.53□□□□□ -0.4
SYNE2-214ENST00000554928 BNC1Q01954 994 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 GALNT2Q10471 571 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 TAZQ16635 292 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 TRIM61Q5EBN2 209 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 FAM46CQ5VWP2 391 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 KIAA0895LQ68EN5 471 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 SLC9A4Q6AI14 798 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 AADACL2Q6P093 401 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 ZSWIM9Q86XI8 627 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 PLPP6Q8IY26 295 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 ATPAF2Q8N5M1 289 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 OR2I1PQ8NGU4 316 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 OR2T34Q8NGX1 318 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 KLK6Q92876 244 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 CCDC114Q96M63 670 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 GDAP1L1Q96MZ0 367 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 KLHL32Q96NJ5 620 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 VPS45Q9NRW7 570 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 DTLQ9NZJ0 730 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 ITM2BQ9Y287 266 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 CAPN6Q9Y6Q1 641 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 LAMA1P25391 3075 aa12.53□□□□□ -0.4
SYNE2-214ENST00000554928 LNP1A1A4G5 178 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 C16orf96A6NNT2 1141 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 PSTPIP1O43586 416 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 LRP3O75074 770 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 IPO7O95373 1038 aaKnown RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 POP4O95707 220 aaKnown RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 IGSF6O95976 241 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 CFIP05156 583 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 ITGB7P26010 798 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 MAT2AP31153 395 aaKnown RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 GARSP41250 739 aaKnown RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 NAP1L1P55209 391 aaKnown RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 MAXP61244 160 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 DYNLT1P63172 113 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 IHHQ14623 411 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 LBRQ14739 615 aaKnown RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 TMCO4Q5TGY1 634 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 SPOCD1Q6ZMY3 1216 aa12.52□□□□□ -0.41
SYNE2-214ENST00000554928 ERN2Q76MJ5 926 aaKnown RBP12.52□□□□□ -0.41
SYNE2-214ENST00000554928 RFX6Q8HWS3 928 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms