RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SRRM3A6NNA2 597 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-210ENST00000553693 C17orf100A8MU93 164 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 LINC01565O15544 149 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 KRT38O76015 456 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 IL1AP01583 271 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 MTNR1AP48039 350 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 ARHGAP8P85298 464 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 EEF1A2Q05639 463 aaKnown RBP4.19□□□□□ -1.74
SCFD1-210ENST00000553693 POU5F1BQ06416 359 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 ST3GAL1Q11201 340 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 TRAF3Q13114 568 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 IL13RA2Q14627 380 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 AP5B1Q2VPB7 878 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 GFI1BQ5VTD9 330 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 WBP2NLQ6ICG8 309 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 GSG1LQ6UXU4 331 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 POF1BQ8WVV4 589 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 THAP4Q8WY91 577 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 SDCCAG3Q96C92 435 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 NPFFR1Q9GZQ6 430 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 DDX31Q9H8H2 851 aaKnown RBP4.19□□□□□ -1.74
SCFD1-210ENST00000553693 OCIAD1Q9NX40 245 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 MORC2Q9Y6X9 1032 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-210ENST00000553693 SCN5AQ14524 2016 aa4.19□□□□□ -1.74
SCFD1-210ENST00000553693 A0A1B0GVM2 712 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 TARSL2A2RTX5 802 aaKnown RBP4.18□□□□□ -1.74
SCFD1-210ENST00000553693 SNRNP70P08621 437 aaKnown RBP4.18□□□□□ -1.74
SCFD1-210ENST00000553693 DCTDP32321 178 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 MXI1P50539 228 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 PEX5P50542 639 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 PRKAA2P54646 552 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 ADORA2A-AS1P86434 159 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 CTTNQ14247 550 aaKnown RBP4.18□□□□□ -1.74
SCFD1-210ENST00000553693 MYBPC2Q14324 1141 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 TIGD6Q17RP2 521 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 ZNF718Q3SXZ3 478 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 ZNF484Q5JVG2 852 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 TYW3Q6IPR3 259 aaKnown RBP4.18□□□□□ -1.74
SCFD1-210ENST00000553693 KLHL24Q6TFL4 600 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 USP43Q70EL4 1123 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 OR4N2Q8NGD1 307 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 HES6Q96HZ4 224 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 HERC2P3Q9BVR0 1158 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 NPLQ9BXD5 320 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-210ENST00000553693 CXorf56Q9H5V9 222 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 GRHPRQ9UBQ7 328 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 SRP68Q9UHB9 627 aaKnown RBP4.18□□□□□ -1.74
SCFD1-210ENST00000553693 PAM16Q9Y3D7 125 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 CLDN16Q9Y5I7 305 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 CUX2O14529 1486 aa4.18□□□□□ -1.74
SCFD1-210ENST00000553693 SCRIBQ14160 1630 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 A0A0U1RQJ8 604 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 FAM157AC9JC47 383 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 CHL1O00533 1208 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 KRT36O76013 467 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 MYF6P23409 242 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 AARSP49588 968 aaKnown RBP eCLIP4.17□□□□□ -1.74
SCFD1-210ENST00000553693 BNC1Q01954 994 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 FAM27E3Q08E93 113 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 UBE4AQ14139 1066 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 RPE65Q16518 533 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 ZNF672Q499Z4 452 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-210ENST00000553693 GJB7Q6PEY0 223 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 GHDCQ8N2G8 530 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 RFLNBQ8N5W9 214 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 ZMIZ2Q8NF64 920 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 CSGALNACT1Q8TDX6 532 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 OTULINQ96BN8 352 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 ADGRG7Q96K78 797 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 MSTO1Q9BUK6 570 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 TWSG1Q9GZX9 223 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 IL25Q9H293 177 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 WDR6Q9NNW5 1121 aaKnown RBP4.17□□□□□ -1.74
SCFD1-210ENST00000553693 ATP8A2Q9NTI2 1148 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 TMEM51Q9NW97 253 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 MDFICQ9P1T7 246 aa4.17□□□□□ -1.74
SCFD1-210ENST00000553693 IFT80Q9P2H3 777 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-210ENST00000553693 DOCK7Q96N67 2140 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 IGLV5-37A0A075B6J1 123 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 DYTNA2CJ06 578 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 IPO5O00410 1097 aaKnown RBP4.16□□□□□ -1.74
SCFD1-210ENST00000553693 DDNO94850 711 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-210ENST00000553693 CH25HO95992 272 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 SERPINC1P01008 464 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 CTPS1P17812 591 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 RPL3P39023 403 aaKnown RBP4.16□□□□□ -1.74
SCFD1-210ENST00000553693 SNTA1Q13424 505 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 ME3Q16798 604 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 FAM76BQ5HYJ3 339 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 ZNF329Q86UD4 541 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 FOXP4Q8IVH2 680 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-210ENST00000553693 DENND6AQ8IWF6 608 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 ANKRD44Q8N8A2 993 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 ZBTB8BQ8NAP8 495 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-210ENST00000553693 NEXN-AS1Q8NBZ9 246 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 SETD9Q8NE22 299 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 MCPH1Q8NEM0 835 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 VPS37AQ8NEZ2 397 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 LILRB1Q8NHL6 650 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-210ENST00000553693 RNF183Q96D59 192 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms