RNA–Protein interactions for RNA: ENST00000549870.5

TUBA1B-205, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-205ENST00000549870 MAGEC1O60732 1142 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 HSF2BPO75031 334 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 GRAP2O75791 330 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 SLC9A1P19634 815 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 HNF1BP35680 557 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 NUDT1P36639 197 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 CNTN1Q12860 1018 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 OVGP1Q12889 678 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 TARDBPQ13148 414 aaKnown RBP eCLIP12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 STAT4Q14765 748 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 ARHGAP44Q17R89 818 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 POM121L1PQ3SYA9 428 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 SFMBT2Q5VUG0 894 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 TRIM65Q6PJ69 517 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 KANSL1Q7Z3B3 1105 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 IQCHQ86VS3 1027 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 TRIM69Q86WT6 500 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 CREBRFQ8IUR6 639 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 PIP4K2CQ8TBX8 421 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 BBC3Q96PG8 261 aaPredicted RBP12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 SRA1Q9HD15 236 aaKnown RBP12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 SLC25A13Q9UJS0 675 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 VANGL2Q9ULK5 521 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 DMTF1Q9Y222 760 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 OR51B4Q9Y5P0 310 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 HS3ST4Q9Y661 456 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 URB1O60287 2271 aaKnown RBP12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 LAMA5O15230 3695 aa12.31□□□□□ -0.44
TUBA1B-205ENST00000549870 COL5A1P20908 1838 aaPredicted RBP12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 C1QTNF3-AMACRE9PGA6 284 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 PRAMEF26H0Y7S4 382 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 ALOX15BO15296 676 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 CLDN11O75508 207 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 ZNF18P17022 549 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 CKMT2P17540 419 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 MX2P20592 715 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 IRAK1P51617 712 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 PCBP4P57723 403 aaKnown RBP12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 APBA1Q02410 837 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 NME3Q13232 169 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 MTA1Q13330 715 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 C5orf22Q49AR2 442 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 HES3Q5TGS1 186 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 AGBL4Q5VU57 503 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 OR6B2Q6IFH4 312 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 FBXL19Q6PCT2 694 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 C11orf57Q6ZUT1 292 aaPredicted RBP12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 C14orf80Q86SX3 495 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 PASD1Q8IV76 773 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 SH2D3CQ8N5H7 860 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 NXPE2Q96DL1 559 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 RASSF4Q9H2L5 321 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 GGT7Q9UJ14 662 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 VPS28Q9UK41 221 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 TBC1D30Q9Y2I9 924 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 BAHCC1Q9P281 2608 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 GOLGA4Q13439 2230 aaKnown RBP12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 ANKRD11Q6UB99 2663 aaPredicted RBP12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 NBEAQ8NFP9 2946 aa12.3□□□□□ -0.44
TUBA1B-205ENST00000549870 M0QYT0 321 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 PAGE1O75459 146 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 MT-CO1P00395 513 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 ERBB2P04626 1255 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 ARAFP10398 606 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 CDH4P55283 916 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 TAS2R38P59533 333 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 SLC6A3Q01959 620 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 SEMG2Q02383 582 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 ILKQ13418 452 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 BECN1Q14457 450 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 SETMARQ53H47 684 aaPredicted RBP12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 OLFML1Q6UWY5 402 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 GBP6Q6ZN66 633 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 FAM183BPQ6ZVS7 135 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 SHC3Q92529 594 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 KLHDC7BQ96G42 594 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 NOX5Q96PH1 765 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 NRSN2Q9GZP1 204 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 SIK2Q9H0K1 926 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 PREBQ9HCU5 417 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 APEX2Q9UBZ4 518 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 CA5BQ9Y2D0 317 aa12.29□□□□□ -0.44
TUBA1B-205ENST00000549870 APC2O95996 2303 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 PDE2AO00408 941 aaPredicted RBP12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 SLC31A1O15431 190 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 TLX3O43711 291 aaPredicted RBP12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 RNGTTO60942 597 aaKnown RBP12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 SDC3O75056 442 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 CNTN5O94779 1100 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 CTSLP07711 333 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 SRCP12931 536 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 ACP1P24666 158 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 PON1P27169 355 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 ITPKBP27987 946 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 KRT9P35527 623 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 EIF2S3P41091 472 aaKnown RBP12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 ABCG1P45844 678 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 SNX16P57768 344 aa12.28□□□□□ -0.44
TUBA1B-205ENST00000549870 KRT83P78385 493 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms