RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 TAF6P49848 677 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 LILRA4P59901 499 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 TBC1D25Q3MII6 688 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 MGAT5BQ3V5L5 792 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 PDZD4Q76G19 769 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 SETD3Q86TU7 594 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 ZNF410Q86VK4 478 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 CNTD1Q8N815 330 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 CATSPER1Q8NEC5 780 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 LRTOMTQ8WZ04 291 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 ZFRQ96KR1 1074 aaKnown RBP14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 ZNF512Q96ME7 567 aaPredicted RBP14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 TMEM30AQ9NV96 361 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 IRAK4Q9NWZ3 460 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 GDAP2Q9NXN4 497 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 PHF24Q9UPV7 400 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 PCDHGA7Q9Y5G6 932 aa14.32□□□□□ -0.12
RAPGEF3-218ENST00000548919 MAGEB16A2A368 324 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 ASB14A6NK59 587 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 ZNF26P17031 533 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 CDH17Q12864 832 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 PDAP1Q13442 181 aaKnown RBP14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 FRG1Q14331 258 aaKnown RBP14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 PPP1R3AQ16821 1122 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 WSCD1Q658N2 575 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 ESRP1Q6NXG1 681 aaKnown RBP14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 CYP2R1Q6VVX0 501 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 HMGCLL1Q8TB92 370 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 ZNF419Q96HQ0 510 aaPredicted RBP14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 TEKT5Q96M29 485 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 OSBPL2Q9H1P3 480 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 POMKQ9H5K3 350 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 COQ10BQ9H8M1 238 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 FBXW11Q9UKB1 542 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 PIN4Q9Y237 131 aaKnown RBP14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 C9IYK1 514 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 GPR32O75388 356 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 YBX3P16989 372 aaKnown RBP eCLIP14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 EPHX2P34913 555 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 GJA9P57773 515 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 PSME3P61289 254 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 APOFQ13790 326 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 LAYNQ6UX15 382 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 RNF135Q8IUD6 432 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 HDAC11Q96DB2 347 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 ZNF560Q96MR9 790 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 TRPC7Q9HCX4 862 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 OR12D3Q9UGF7 316 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 BCAP29Q9UHQ4 241 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 RNF11Q9Y3C5 154 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 COL1A2P08123 1366 aa14.31□□□□□ -0.12
RAPGEF3-218ENST00000548919 FAM95CA0A1B0GW59 222 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 ERI2A8K979 691 aaKnown RBP14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 AURKAO14965 403 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 SLC22A2O15244 555 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 MT-CO1P00395 513 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 CD4P01730 458 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 SLC5A2P31639 672 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 PLK1P53350 603 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 RAB10P61026 200 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 GALNT2Q10471 571 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 HERC3Q15034 1050 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 ITPRIPL1Q6GPH6 555 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 TMEM126BQ8IUX1 230 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 ARRDC4Q8NCT1 418 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 IPMKQ8NFU5 416 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 TMEM40Q8WWA1 233 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 DLG3Q92796 817 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 TMIGD2Q96BF3 282 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 ELMO2Q96JJ3 720 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 KIFC1Q9BW19 673 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 ATXN3LQ9H3M9 355 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 CCDC167Q9P0B6 97 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 GMPR2Q9P2T1 348 aaKnown RBP14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 HEMK1Q9Y5R4 338 aaPredicted RBP14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 TRIM38O00635 465 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 LRIG2O94898 1065 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 PSMC3P17980 439 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 KCNA5P22460 613 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 ARNTP27540 789 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 TRIM67Q6ZTA4 783 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 FAM110BQ8TC76 370 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 HEXDCQ8WVB3 486 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 SLC2A11Q9BYW1 496 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 TKTL2Q9H0I9 626 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 CHST12Q9NRB3 414 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 TRHDEQ9UKU6 1024 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 DMTF1Q9Y222 760 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 TIMM13Q9Y5L4 95 aaPredicted RBP14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 SNX13Q9Y5W8 968 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 NRCAMQ92823 1304 aa14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 BRCA1P38398 1863 aaKnown RBP14.3□□□□□ -0.12
RAPGEF3-218ENST00000548919 SLCO1B7G3V0H7 640 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 DFFAO00273 331 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 STRNO43815 780 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 STMN1P16949 149 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 SLC1A2P43004 574 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 TAS2R39P59534 338 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 C1QTNF8P60827 252 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 CCNA1P78396 465 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms