RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 GALNT2Q10471 571 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 PRKD1Q15139 912 aaPredicted RBP17.69■□□□□ 0.42
HDAC7-227ENST00000548080 ZDHHC24Q6UX98 284 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 TP53INP2Q8IXH6 220 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 CCNYQ8ND76 341 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 LRRN4Q8WUT4 740 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 ART4Q93070 314 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 MYO19Q96H55 970 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 LGMNQ99538 433 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 GABRG3Q99928 467 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 FERMT1Q9BQL6 677 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 ZDHHC18Q9NUE0 388 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 TMEM248Q9NWD8 314 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 INVSQ9Y283 1065 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 CKAP5Q14008 2032 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 TTC34A8MYJ7 566 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 NDC80O14777 642 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 FAM153BP0C7A2 387 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 ACTN2P35609 894 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 ECT2LQ008S8 904 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 CAV1Q03135 178 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 AP1B1Q10567 949 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 P3H1Q32P28 736 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 FAM153CQ494X1 144 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 HSF5Q4G112 596 aaPredicted RBP17.69■□□□□ 0.42
HDAC7-227ENST00000548080 C6orf118Q5T5N4 469 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 LINGO4Q6UY18 593 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 LEKR1Q6ZMV7 388 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 PGBD3Q8N328 593 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 MDGA1Q8NFP4 955 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 KCNV2Q8TDN2 545 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 HTR3CQ8WXA8 447 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 CELF6Q96J87 481 aaKnown RBP17.69■□□□□ 0.42
HDAC7-227ENST00000548080 RETREG1Q9H6L5 497 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 BCCIPQ9P287 314 aaKnown RBP eCLIP17.69■□□□□ 0.42
HDAC7-227ENST00000548080 FAM153AQ9UHL3 310 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 VPS51Q9UID3 782 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 ANAPC5Q9UJX4 755 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 ACTL7AQ9Y615 435 aa17.69■□□□□ 0.42
HDAC7-227ENST00000548080 NUP205Q92621 2012 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 FANCMQ8IYD8 2048 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 C5orf60A6NFR6 353 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 DNALI1O14645 258 aaPredicted RBP17.68■□□□□ 0.42
HDAC7-227ENST00000548080 GCATO75600 419 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 APBB3O95704 486 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 VAV1P15498 845 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 GARSP41250 739 aaKnown RBP17.68■□□□□ 0.42
HDAC7-227ENST00000548080 PLK1P53350 603 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 ITGA8P53708 1063 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 GNA12Q03113 381 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 SLC12A1Q13621 1099 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 IZUMO3Q5VZ72 239 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 AFMIDQ63HM1 303 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 C4orf22Q6V702 233 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 SETD3Q86TU7 594 aaPredicted RBP17.68■□□□□ 0.42
HDAC7-227ENST00000548080 ARHGAP12Q8IWW6 846 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 UMODL1-AS1Q8N2C9 162 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 FBXO25Q8TCJ0 367 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 CAVIN3Q969G5 261 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 HDAC11Q96DB2 347 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 KCNH6Q9H252 994 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 CD248Q9HCU0 757 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 ATP13A1Q9HD20 1204 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 POLMQ9NP87 494 aaPredicted RBP17.68■□□□□ 0.42
HDAC7-227ENST00000548080 PAK5Q9P286 719 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 MTRF1LQ9UGC7 380 aaKnown RBP17.68■□□□□ 0.42
HDAC7-227ENST00000548080 TPX2Q9ULW0 747 aaKnown RBP17.68■□□□□ 0.42
HDAC7-227ENST00000548080 VPS13AQ96RL7 3174 aa17.68■□□□□ 0.42
HDAC7-227ENST00000548080 DMDP11532 3685 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 NYNRINQ9P2P1 1898 aaKnown RBP17.67■□□□□ 0.42
HDAC7-227ENST00000548080 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.67■□□□□ 0.42
HDAC7-227ENST00000548080 ILVBLA1L0T0 632 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 CBX4O00257 560 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 DFFAO00273 331 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 STK10O94804 968 aaKnown RBP17.67■□□□□ 0.42
HDAC7-227ENST00000548080 MT-CO1P00395 513 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 ASLP04424 464 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 GABRG2P18507 467 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 NDST2P52849 883 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 OXCT1P55809 520 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 ST8SIA6P61647 398 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 PPIDQ08752 370 aaKnown RBP17.67■□□□□ 0.42
HDAC7-227ENST00000548080 ENPP2Q13822 863 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 ZNF528Q3MIS6 628 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 TSGA13Q96PP4 275 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 FMO2Q99518 471 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 SLC39A8Q9C0K1 460 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 TMEM245Q9H330 911 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 NOL6Q9H6R4 1146 aaKnown RBP17.67■□□□□ 0.42
HDAC7-227ENST00000548080 CD93Q9NPY3 652 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 ZSCAN32Q9NX65 697 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 CHD5Q8TDI0 1954 aa17.67■□□□□ 0.42
HDAC7-227ENST00000548080 MYO15AQ9UKN7 3530 aa17.66■□□□□ 0.42
HDAC7-227ENST00000548080 K7ERQ8 282 aa17.66■□□□□ 0.42
HDAC7-227ENST00000548080 AXIN1O15169 862 aa17.66■□□□□ 0.42
HDAC7-227ENST00000548080 MTSS1O43312 755 aa17.66■□□□□ 0.42
HDAC7-227ENST00000548080 SYNCRIPO60506 623 aaKnown RBP17.66■□□□□ 0.42
HDAC7-227ENST00000548080 NDUFV2P19404 249 aa17.66■□□□□ 0.42
HDAC7-227ENST00000548080 TNNT3P45378 269 aaPredicted RBP17.66■□□□□ 0.42
HDAC7-227ENST00000548080 MAPKAPK2P49137 400 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms