RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 LRWD1Q9UFC0 647 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 TAGLN3Q9UI15 199 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 VAV3Q9UKW4 847 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 PCDHGB4Q9UN71 923 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 PCDHA4Q9UN74 947 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 PLAGL2Q9UPG8 496 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 ACOT9Q9Y305 439 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 TMX2Q9Y320 296 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 PCDHA3Q9Y5H8 950 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 RBM8AQ9Y5S9 174 aaKnown RBP5.26□□□□□ -1.57
SNHG1-218ENST00000541615 SESN1Q9Y6P5 492 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 AP1M2Q9Y6Q5 423 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 KDM5AP29375 1690 aaKnown RBP5.26□□□□□ -1.57
SNHG1-218ENST00000541615 ZMYM2Q9UBW7 1377 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 USP32Q8NFA0 1604 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 CDC42BPBQ9Y5S2 1711 aa5.26□□□□□ -1.57
SNHG1-218ENST00000541615 UTYO14607 1347 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 CEP170BQ9Y4F5 1589 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 NCAPD2Q15021 1401 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 A0A087WWV3 80 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 TRAV20A0A0B4J274 112 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 NPHP3-ACAD11A0A0J9YXS1 232 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 A0A1W2PRG0 241 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 FAM92AA1XBS5 289 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 FAM221BA6H8Z2 402 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 ARHGAP42A6NI28 874 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 TMEM210A6NLX4 147 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 LEUTXA8MZ59 168 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 B2RBV5 119 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 CHURC1-FNTBB4DL54 471 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 HSBP1L1C9JCN9 74 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 H3BMQ9 156 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 STX7O15400 261 aaKnown RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 DAPK3O43293 454 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 RIPK2O43353 540 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 FAM189A1O60320 539 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 PIP5K1CO60331 668 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 BRINP1O60477 761 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 NDUFS2O75306 463 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 IDH1O75874 414 aaKnown RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 PRKD3O94806 890 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 CCNB2O95067 398 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 MOCS3O95396 460 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 OPN1LWP04000 364 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 URODP06132 367 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 UBTFL1P0CB47 393 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 HSPD1P10809 573 aaKnown RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 PSKH1P11801 424 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 MYL4P12829 197 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 GNSP15586 552 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 CHRNA5P30532 468 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 RORAP35398 523 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 EIF2S3P41091 472 aaKnown RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 BTDP43251 543 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 NR4A2P43354 598 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 ARCN1P48444 511 aaKnown RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 TKTL1P51854 596 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 PPP5CP53041 499 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 CDH6P55285 790 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 RAB25P57735 213 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 AP1S1P61966 158 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 IFI35P80217 286 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 NFATC3Q12968 1075 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 SLC29A2Q14542 456 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 RFTN1Q14699 578 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 PPP2R5DQ14738 602 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 EMC2Q15006 297 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 PDK2Q15119 407 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 PON2Q15165 354 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 SEC23AQ15436 765 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 SGCAQ16586 387 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 CA9Q16790 459 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 TWISTNBQ3B726 338 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 HSD17B12Q53GQ0 312 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 ZMAT1Q5H9K5 638 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 TOR2AQ5JU69 321 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 THEM4Q5T1C6 240 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 CCNYL2Q5T2Q4 361 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 PPP1R26Q5T8A7 1209 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 ATF7IP2Q5U623 682 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 TIGD3Q6B0B8 471 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 SLFN12LQ6IEE8 588 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 GALNT18Q6P9A2 607 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 WDR59Q6PJI9 974 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 NEK8Q86SG6 692 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 KBTBD6Q86V97 674 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 ZNF227Q86WZ6 799 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 MAPKAPK5Q8IW41 473 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 TRMT44Q8IYL2 757 aaKnown RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 RNF113BQ8IZP6 322 aaKnown RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 RBFAQ8N0V3 343 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 PQLC1Q8N2U9 271 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 CLIP4Q8N3C7 705 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 CCDC185Q8N715 623 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 TDRD5Q8NAT2 981 aaKnown RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 SLC37A3Q8NCC5 494 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 TRPV3Q8NET8 790 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 SLC24A4Q8NFF2 622 aa5.25□□□□□ -1.57
SNHG1-218ENST00000541615 HDAC2Q92769 488 aaKnown RBP5.25□□□□□ -1.57
SNHG1-218ENST00000541615 HLA-CQ95604 372 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms