RNA–Protein interactions for RNA: ENST00000538261.7

CLDN7-203, Transcript of claudin 7, humanhuman

TSL 5 BASIC

Gene CLDN7, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-203ENST00000538261 GFRA2O00451 464 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 TRDMT1O14717 391 aaKnown RBP17.7■□□□□ 0.42
CLDN7-203ENST00000538261 HGSO14964 777 aaPredicted RBP17.7■□□□□ 0.42
CLDN7-203ENST00000538261 TYROBPO43914 113 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 RAMP2O60895 175 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 FESP07332 822 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 KRT15P19012 456 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 OR1E1P30953 314 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 ELK3P41970 407 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 CDH4P55283 916 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 RABGAP1LQ5R372 815 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 KCTD11Q693B1 232 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 SHKBP1Q8TBC3 707 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 USP33Q8TEY7 942 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 PYROXD1Q8WU10 500 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 GCNAQ96QF7 691 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 FAM167BQ9BTA0 163 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 MLPHQ9BV36 600 aaPredicted RBP17.7■□□□□ 0.42
CLDN7-203ENST00000538261 PBX4Q9BYU1 374 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 XAB2Q9HCS7 855 aaKnown RBP17.7■□□□□ 0.42
CLDN7-203ENST00000538261 ZFP69BQ9UJL9 534 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 CHMP2BQ9UQN3 213 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 MOSPD3O75425 235 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 CKMP06732 381 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 TROVE2P10155 538 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLDN7-203ENST00000538261 PFKLP17858 780 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 FAM217AQ8IXS0 508 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 ATP11CQ8NB49 1132 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 OR52K2Q8NGK3 314 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 PSMC3IPQ9P2W1 217 aaPredicted RBP17.7■□□□□ 0.42
CLDN7-203ENST00000538261 DNMT3BQ9UBC3 853 aaKnown RBP17.7■□□□□ 0.42
CLDN7-203ENST00000538261 STOML1Q9UBI4 398 aa17.7■□□□□ 0.42
CLDN7-203ENST00000538261 TRAV19A0A0A6YYK7 116 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 J3KR12 359 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 SCAMP3O14828 347 aaKnown RBP17.69■□□□□ 0.42
CLDN7-203ENST00000538261 PER2O15055 1255 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 AP2A1O95782 977 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 HLA-DQB2P05538 268 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 HNRNPA1P09651 372 aaKnown RBP eCLIP17.69■□□□□ 0.42
CLDN7-203ENST00000538261 MLNP12872 115 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 CA4P22748 312 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 SSTR1P30872 391 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 RPA3P35244 121 aaPredicted RBP17.69■□□□□ 0.42
CLDN7-203ENST00000538261 YBEYP58557 167 aaPredicted RBP17.69■□□□□ 0.42
CLDN7-203ENST00000538261 SERINC3Q13530 473 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 POLD3Q15054 466 aaPredicted RBP17.69■□□□□ 0.42
CLDN7-203ENST00000538261 CAPN12Q6ZSI9 719 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 CHST9Q7L1S5 443 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 NLRP9Q7RTR0 991 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 ADGRD2Q7Z7M1 963 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 DNAJC9Q8WXX5 260 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 ZNF75CPQ92670 426 aaPredicted RBP17.69■□□□□ 0.42
CLDN7-203ENST00000538261 TCEAL4Q96EI5 215 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 SLC46A2Q9BY10 475 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 CERS4Q9HA82 394 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 HCFC2Q9Y5Z7 792 aa17.69■□□□□ 0.42
CLDN7-203ENST00000538261 A0A1B0GVM2 712 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 TCAF2A6NFQ2 919 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 POC1B-GALNT4F8VUJ3 575 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 CLDN11O75508 207 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 TSHRP16473 764 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 GM2AP17900 193 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 ACVRL1P37023 503 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 PTDSS1P48651 473 aaKnown RBP17.68■□□□□ 0.42
CLDN7-203ENST00000538261 KLC1Q07866 573 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 ZRSR2Q15696 482 aaKnown RBP17.68■□□□□ 0.42
CLDN7-203ENST00000538261 ANO4Q32M45 955 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 COL13A1Q5TAT6 717 aaPredicted RBP17.68■□□□□ 0.42
CLDN7-203ENST00000538261 LRRC8BQ6P9F7 803 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 OTOP3Q7RTS5 596 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 OTOAQ7RTW8 1153 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 OXNAD1Q96HP4 312 aaPredicted RBP17.68■□□□□ 0.42
CLDN7-203ENST00000538261 SIGLEC10Q96LC7 697 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 DDX50Q9BQ39 737 aaKnown RBP17.68■□□□□ 0.42
CLDN7-203ENST00000538261 VPS37BQ9H9H4 285 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 PLAC1Q9HBJ0 212 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 SLCO1B3Q9NPD5 702 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 GRID1Q9ULK0 1009 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 CCDC85CA6NKD9 419 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 ERI2A8K979 691 aaKnown RBP17.68■□□□□ 0.42
CLDN7-203ENST00000538261 RHOP08100 348 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 NEFHP12036 1026 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 PTPN2P17706 415 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 OLIG2Q13516 323 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 HNRNPDQ14103 355 aaKnown RBP17.68■□□□□ 0.42
CLDN7-203ENST00000538261 SLC1A5Q15758 541 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 SLC5A9Q2M3M2 681 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 TAF1BQ53T94 588 aaPredicted RBP17.68■□□□□ 0.42
CLDN7-203ENST00000538261 TRIM68Q6AZZ1 485 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 IRGCQ6NXR0 463 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 MPP5Q8N3R9 675 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 LRRC39Q96DD0 335 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 GDF15Q99988 308 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 DENND2DQ9H6A0 471 aaPredicted RBP17.68■□□□□ 0.42
CLDN7-203ENST00000538261 SP110Q9HB58 689 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 PDFQ9HBH1 243 aa17.68■□□□□ 0.42
CLDN7-203ENST00000538261 RBM22Q9NW64 420 aaKnown RBP eCLIP17.68■□□□□ 0.42
CLDN7-203ENST00000538261 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.67■□□□□ 0.42
CLDN7-203ENST00000538261 A0A0D9SEW6 157 aa17.67■□□□□ 0.42
CLDN7-203ENST00000538261 TSPAN3O60637 253 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms