RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-208ENST00000536710 TYW5A2RUC4 315 aaKnown RBP5.7□□□□□ -1.5
PRKDC-208ENST00000536710 CYR61O00622 381 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 RNMTO43148 476 aaKnown RBP5.7□□□□□ -1.5
PRKDC-208ENST00000536710 TIMM44O43615 452 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 WNT1P04628 370 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 EDN2P20800 178 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 BMP5P22003 454 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 TTKP33981 857 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 RFC1P35251 1148 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-208ENST00000536710 SLC16A2P36021 539 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 ARHGAP25P42331 645 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 PROK1P58294 105 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 NUCB1Q02818 461 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 ZNF91Q05481 1191 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 CUL4AQ13619 759 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 FRG1Q14331 258 aaKnown RBP5.7□□□□□ -1.5
PRKDC-208ENST00000536710 DPCR1Q3MIW9 517 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 CEP78Q5JTW2 689 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 TTC39AQ5SRH9 613 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 CFAP58Q5T655 872 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 MEX3CQ5U5Q3 659 aaKnown RBP5.7□□□□□ -1.5
PRKDC-208ENST00000536710 TBC1D9BQ66K14 1250 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 HMBOX1Q6NT76 420 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 TTI2Q6NXR4 508 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 ZNF66Q6ZN08 573 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 DBX2Q6ZNG2 339 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 GSTA5Q7RTV2 222 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 FAM185AQ8N0U4 392 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 SLC25A41Q8N5S1 370 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 TMEM116Q8NCL8 245 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 SCFD2Q8WU76 684 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 GTF3C6Q969F1 213 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 CHFRQ96EP1 664 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 RSRC1Q96IZ7 334 aaKnown RBP5.7□□□□□ -1.5
PRKDC-208ENST00000536710 CLMNQ96JQ2 1002 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 H2AFJQ9BTM1 129 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 ZNF215Q9UL58 517 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-208ENST00000536710 A4GNTQ9UNA3 340 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.7□□□□□ -1.5
PRKDC-208ENST00000536710 CAPN7Q9Y6W3 813 aa5.7□□□□□ -1.5
PRKDC-208ENST00000536710 RSF1Q96T23 1441 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-208ENST00000536710 ZNF335Q9H4Z2 1342 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-208ENST00000536710 LIPT2A6NK58 231 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 AHCYL1O43865 530 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 TUBB4AP04350 444 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 EIF2S1P05198 315 aaKnown RBP5.69□□□□□ -1.5
PRKDC-208ENST00000536710 RARGP13631 454 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 ZNF8P17098 575 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-208ENST00000536710 ACTN2P35609 894 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 TMPRSS3P57727 454 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 RPS13P62277 151 aaKnown RBP5.69□□□□□ -1.5
PRKDC-208ENST00000536710 MC1RQ01726 317 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 COL10A1Q03692 680 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 FOXF2Q12947 444 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 WTAPQ15007 396 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 HIST2H2ACQ16777 129 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-208ENST00000536710 MIDNQ504T8 468 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 ZKSCAN2Q63HK3 967 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 CPLX2Q6PUV4 134 aaKnown RBP5.69□□□□□ -1.5
PRKDC-208ENST00000536710 CYP20A1Q6UW02 462 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 C16orf54Q6UWD8 224 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 PTF1AQ7RTS3 328 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 RD3Q7Z3Z2 195 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 TBC1D26Q86UD7 250 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 TRIM74Q86UV6 250 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 TRIM73Q86UV7 250 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 TDRPQ86YL5 185 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 GALNT16Q8N428 558 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 FAM98AQ8NCA5 519 aaKnown RBP5.69□□□□□ -1.5
PRKDC-208ENST00000536710 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-208ENST00000536710 NELL1Q92832 810 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 FAM149B1Q96BN6 582 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 ZC3HAV1LQ96H79 300 aaKnown RBP5.69□□□□□ -1.5
PRKDC-208ENST00000536710 CENPOQ9BU64 300 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 TUBB6Q9BUF5 446 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 R3HDMLQ9H3Y0 253 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 KAT14Q9H8E8 782 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 CLIC5Q9NZA1 410 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 NRBP1Q9UHY1 535 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 INTS6Q9UL03 887 aaKnown RBP5.69□□□□□ -1.5
PRKDC-208ENST00000536710 FAM96BQ9Y3D0 163 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 ADGRF5Q8IZF2 1346 aa5.69□□□□□ -1.5
PRKDC-208ENST00000536710 WDR33Q9C0J8 1336 aaKnown RBP5.69□□□□□ -1.5
PRKDC-208ENST00000536710 A0A096LPK6 155 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 TRBV5-7A0A0A0MS05 114 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 MYO1GB0I1T2 1018 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 IFNL4K9M1U5 179 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 PRPF4O43172 522 aaKnown RBP eCLIP5.68□□□□□ -1.5
PRKDC-208ENST00000536710 LIASO43766 372 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 TSPAN9O75954 239 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 HEXAP06865 529 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 KRT10P13645 584 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 PTPN2P17706 415 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 HADHAP40939 763 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 SNX16P57768 344 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 CREB5Q02930 508 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 CFHR1Q03591 330 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 GAD2Q05329 585 aa5.68□□□□□ -1.5
PRKDC-208ENST00000536710 SLC18A2Q05940 514 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms