RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 OSBPL11Q9BXB4 747 aa18.11■□□□□ 0.49
LTBP3-210ENST00000528516 ADNPQ9H2P0 1102 aa18.11■□□□□ 0.49
LTBP3-210ENST00000528516 STN1Q9H668 368 aaKnown RBP18.11■□□□□ 0.49
LTBP3-210ENST00000528516 PRPF19Q9UMS4 504 aaKnown RBP18.11■□□□□ 0.49
LTBP3-210ENST00000528516 ANGPT2O15123 496 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 WNT7BP56706 349 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 OLIG2Q13516 323 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 APOFQ13790 326 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 DCDC5Q6ZRR9 648 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 TTC39CQ8N584 583 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.1■□□□□ 0.49
LTBP3-210ENST00000528516 TUBGCP3Q96CW5 907 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 NOL11Q9H8H0 719 aaKnown RBP18.1■□□□□ 0.49
LTBP3-210ENST00000528516 LRRC40Q9H9A6 602 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 ATAD3AQ9NVI7 634 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 ZNF358Q9NW07 568 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 MAP3K20Q9NYL2 800 aaKnown RBP18.1■□□□□ 0.49
LTBP3-210ENST00000528516 TMX2-CTNND1H3BSU7 103 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 RNASEH2AO75792 299 aaKnown RBP18.1■□□□□ 0.49
LTBP3-210ENST00000528516 FBXO21O94952 628 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 YBX3P16989 372 aaKnown RBP eCLIP18.1■□□□□ 0.49
LTBP3-210ENST00000528516 CKMT2P17540 419 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 EFEMP1Q12805 493 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 RBBP7Q16576 425 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 ZNF470Q6ECI4 717 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 TTC30BQ8N4P2 665 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 ZNF781Q8N8C0 355 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 ZNF778Q96MU6 729 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 HNRNPABQ99729 332 aaKnown RBP18.1■□□□□ 0.49
LTBP3-210ENST00000528516 EFCAB1Q9HAE3 211 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 CCL22O00626 93 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 FUCA1P04066 466 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 ZNF143P52747 638 aaPredicted RBP18.1■□□□□ 0.49
LTBP3-210ENST00000528516 HUNKP57058 714 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 MAXP61244 160 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 BST2Q10589 180 aaKnown RBP18.1■□□□□ 0.49
LTBP3-210ENST00000528516 CA9Q16790 459 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 SV2CQ496J9 727 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 C10orf120Q5SQS8 335 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 SEL1L3Q68CR1 1132 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 GPR152Q8TDT2 470 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 NPAS2Q99743 824 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 LATS2Q9NRM7 1088 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 SNX10Q9Y5X0 201 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 SLX4Q8IY92 1834 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 ZNF831Q5JPB2 1677 aa18.1■□□□□ 0.49
LTBP3-210ENST00000528516 RGSL1A5PLK6 1076 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 A8MX80 341 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 SUPT3HB4E1H0 165 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 MAFO75444 373 aaPredicted RBP18.09■□□□□ 0.49
LTBP3-210ENST00000528516 TADA2AO75478 443 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 TGFB3P10600 412 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 CHRM3P20309 590 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 MS4A2Q01362 244 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 ZNF829Q3KNS6 432 aaPredicted RBP18.09■□□□□ 0.49
LTBP3-210ENST00000528516 SLC2A7Q6PXP3 512 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 CTU1Q7Z7A3 348 aaKnown RBP18.09■□□□□ 0.49
LTBP3-210ENST00000528516 MIER2Q8N344 545 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 SHCBP1Q8NEM2 672 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 OR52B2Q96RD2 323 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.09■□□□□ 0.49
LTBP3-210ENST00000528516 C9JVG2 144 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 ADAM23O75077 832 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 PIGNO95427 931 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 MBLAC2Q68D91 279 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 TMEM26Q6ZUK4 368 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 SZRD1Q7Z422 152 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 CRYGNQ8WXF5 182 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 APOL5Q9BWW9 433 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 MINDY3Q9H8M7 445 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 VPS45Q9NRW7 570 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 TUBA8Q9NY65 449 aaPredicted RBP18.09■□□□□ 0.49
LTBP3-210ENST00000528516 ACOT9Q9Y305 439 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 SYNDIG1LA6NDD5 238 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 ITGB6P18564 788 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 CYP2A13Q16696 494 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 DLG3Q92796 817 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 TMPRSS4Q9NRS4 437 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 DNAJC28Q9NX36 388 aa18.09■□□□□ 0.49
LTBP3-210ENST00000528516 PGGT1BP53609 377 aa18.08■□□□□ 0.49
LTBP3-210ENST00000528516 GALNT18Q6P9A2 607 aa18.08■□□□□ 0.49
LTBP3-210ENST00000528516 SCIMPQ6UWF3 145 aa18.08■□□□□ 0.49
LTBP3-210ENST00000528516 TKTL2Q9H0I9 626 aa18.08■□□□□ 0.49
LTBP3-210ENST00000528516 PCDHAC1Q9H158 963 aa18.08■□□□□ 0.49
LTBP3-210ENST00000528516 HPS4Q9NQG7 708 aa18.08■□□□□ 0.49
LTBP3-210ENST00000528516 RIMS3Q9UJD0 308 aa18.08■□□□□ 0.49
LTBP3-210ENST00000528516 ATAD5Q96QE3 1844 aa18.08■□□□□ 0.49
LTBP3-210ENST00000528516 TRDMT1O14717 391 aaKnown RBP18.08■□□□□ 0.48
LTBP3-210ENST00000528516 PLIN3O60664 434 aa18.08■□□□□ 0.48
LTBP3-210ENST00000528516 FGF3P11487 239 aaPredicted RBP18.08■□□□□ 0.48
LTBP3-210ENST00000528516 HNRNPLP14866 589 aaKnown RBP eCLIP18.08■□□□□ 0.481e-12■■■■□ 22.2
LTBP3-210ENST00000528516 JAK1P23458 1154 aa18.08■□□□□ 0.48
LTBP3-210ENST00000528516 ACADVLP49748 655 aa18.08■□□□□ 0.48
LTBP3-210ENST00000528516 ZNF252P-AS1Q0IIN9 211 aa18.08■□□□□ 0.48
LTBP3-210ENST00000528516 DLG2Q15700 870 aa18.08■□□□□ 0.48
LTBP3-210ENST00000528516 C9orf131Q5VYM1 1079 aa18.08■□□□□ 0.48
LTBP3-210ENST00000528516 NAPEPLDQ6IQ20 393 aa18.08■□□□□ 0.48
LTBP3-210ENST00000528516 TAMM41Q96BW9 452 aa18.08■□□□□ 0.48
LTBP3-210ENST00000528516 XPNPEP3Q9NQH7 507 aa18.08■□□□□ 0.48
LTBP3-210ENST00000528516 OLA1Q9NTK5 396 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms