RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	CARNS1	A5YM72	827 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	PITPNM1	O00562	1244 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	SLC7A4	O43246	635 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	MSI1	O43347	362 aa	Known RBP	10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	PEX11A	O75192	247 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	CIB2	O75838	187 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	HSPA4L	O95757	839 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	HLA-DQB2	P05538	268 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	ZDHHC11B	P0C7U3	371 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	STMN1	P16949	149 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	PBX3	P40426	434 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	ARCN1	P48444	511 aa	Known RBP	10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	SERPINH1	P50454	418 aa	Known RBP	10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	WNT3A	P56704	352 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	RAB10	P61026	200 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	MBTPS1	Q14703	1052 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	TRMT5	Q32P41	509 aa	Known RBP	10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	C5orf22	Q49AR2	442 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	MS4A13	Q5J8X5	152 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	CFAP157	Q5JU67	520 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	PIK3R6	Q5UE93	754 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	RAPH1	Q70E73	1250 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	SETD3	Q86TU7	594 aa	Predicted RBP	10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	BBS5	Q8N3I7	341 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	STYX	Q8WUJ0	223 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	AZIN2	Q96A70	460 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	TADA1	Q96BN2	335 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	FAR2	Q96K12	515 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	MRGPRX2	Q96LB1	330 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	NUDCD1	Q96RS6	583 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	AGAP2	Q99490	1192 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	SORT1	Q99523	831 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	TTLL2	Q9BWV7	592 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	ACE2	Q9BYF1	805 aa	Predicted RBP	10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	DRC3	Q9H069	523 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	CDH19	Q9H159	772 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	MARCH2	Q9P0N8	246 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	SLC39A10	Q9ULF5	831 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	RAP2C	Q9Y3L5	183 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216	DOCK4	Q8N1I0	1966 aa		10.34	□□□□□ -0.75
PGAP2-231	ENST00000528216		B2RBV5	119 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216		G3V2L1	256 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	TBC1D4	O60343	1298 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	NPHS1	O60500	1241 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	PQBP1	O60828	265 aa	Known RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	RAMP2	O60895	175 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	LUC7L3	O95232	432 aa	Known RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	HAPLN1	P10915	354 aa	Predicted RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	CES1	P23141	567 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	PGM1	P36871	562 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	SLC12A2	P55011	1212 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	DNAJB13	P59910	316 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	PRKAA1	Q13131	559 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	ITGA9	Q13797	1035 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	GRM3	Q14832	879 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	LRRC26	Q2I0M4	334 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	HSF5	Q4G112	596 aa	Predicted RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	PPM1J	Q5JR12	505 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	RABGAP1L	Q5R372	815 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	FAM171A1	Q5VUB5	890 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	CES4A	Q5XG92	561 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	KLHDC10	Q6PID8	442 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	NET1	Q7Z628	596 aa	Predicted RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	CMC1	Q7Z7K0	106 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	ALYREF	Q86V81	257 aa	Known RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	SPATA22	Q8NHS9	363 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	USP33	Q8TEY7	942 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	MIPEP	Q99797	713 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	APOL2	Q9BQE5	337 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	HTATIP2	Q9BUP3	242 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	DENND2D	Q9H6A0	471 aa	Predicted RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	BATF3	Q9NR55	127 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	GMIP	Q9P107	970 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	SLC17A6	Q9P2U8	582 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	MCM8	Q9UJA3	840 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	LRFN2	Q9ULH4	789 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	FAM95C	A0A1B0GW59	222 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	ENPP3	O14638	875 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	TM7SF2	O76062	418 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	VAPB	O95292	243 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	MOCS2	O96007	188 aa	Predicted RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	PEX11B	O96011	259 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	PENK	P01210	267 aa	Predicted RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	TPBGL	P0DKB5	382 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	TPH1	P17752	444 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	HLA-DPA1	P20036	260 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	TUFM	P49411	452 aa	Known RBP	10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	NUMB	P49757	651 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	IDH3A	P50213	366 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	IRX4	P78413	519 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	TUBB3	Q13509	450 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	TRIM60	Q495X7	471 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	SH2D4B	Q5SQS7	431 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	TSTD2	Q5T7W7	516 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	SNX30	Q5VWJ9	437 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	NEPRO	Q6NW34	567 aa		10.33	□□□□□ -0.76
PGAP2-231	ENST00000528216	EPGN	Q6UW88	154 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms