RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GPC5P78333 572 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 TXNL4AP83876 142 aaKnown RBP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 SREBF2Q12772 1141 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 CUL4AQ13619 759 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 COG2Q14746 738 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 CNGA2Q16280 664 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 CDC37Q16543 378 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 FAM110CQ1W6H9 321 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 CCDC96Q2M329 555 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 QRICH1Q2TAL8 776 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 ASPRV1Q53RT3 343 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 KIAA1161Q6NSJ0 714 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 CCDC174Q6PII3 467 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 LVRNQ6Q4G3 990 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 USP49Q70CQ1 688 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 FASTKD5Q7L8L6 764 aaKnown RBP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 CCDC83Q8IWF9 413 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 YAF2Q8IY57 180 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 ANKRD13CQ8N6S4 541 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 ADAMTS15Q8TE58 950 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 PIBF1Q8WXW3 757 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 ZNF274Q96GC6 653 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 ZDHHC12Q96GR4 267 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 SLF1Q9BQI6 1058 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 PAGR1Q9BTK6 254 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 SPZ1Q9BXG8 430 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 MOV10L1Q9BXT6 1211 aaKnown RBP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 SPATC1LQ9H0A9 340 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 FAM234AQ9H0X4 552 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 SH2D4AQ9H788 454 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 RAVER2Q9HCJ3 691 aaKnown RBP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 VAT1LQ9HCJ6 419 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 ZCCHC17Q9NP64 241 aaKnown RBP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 C1orf112Q9NSG2 853 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 WWOXQ9NZC7 414 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 TMOD4Q9NZQ9 345 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 COL20A1Q9P218 1284 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 DKK4Q9UBT3 224 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 MORF4L1Q9UBU8 362 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 FZD4Q9ULV1 537 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 NAP1L2Q9ULW6 460 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 SLC45A1Q9Y2W3 748 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-208ENST00000524652 SQORQ9Y6N5 450 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 CHD6Q8TD26 2715 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 MYH11P35749 1972 aa3.31□□□□□ -1.88
CSDE1-208ENST00000524652 SIP14410 1827 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 EPG5Q9HCE0 2579 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 CFAP47Q6ZTR5 3102 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 KIAA0100Q14667 2235 aaKnown RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 RAB27BO00194 218 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 MEIS2O14770 477 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 ZBTB5O15062 677 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 INPPL1O15357 1258 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 EDIL3O43854 480 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 CRYABP02511 175 aaKnown RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 ALPLP05186 524 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 CALM1P0DP23 149 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 CALM2P0DP24 149 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 CALM3P0DP25 149 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 IFNAR1P17181 557 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 TPH1P17752 444 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 HTR6P50406 440 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 ITGA8P53708 1063 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 RCAN1P53805 252 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 NANOS2P60321 138 aaKnown RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 RPS16P62249 146 aaKnown RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 IRX3P78415 501 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 DEUP1Q05D60 604 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 SEMA3AQ14563 771 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 KCTD2Q14681 263 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 PFKFB3Q16875 520 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 USH1GQ495M9 461 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 EARS2Q5JPH6 523 aaKnown RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 GPATCH4Q5T3I0 446 aaKnown RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 SNRNP48Q6IEG0 339 aaKnown RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 FAM160B2Q86V87 743 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 CPXCR1Q8N123 301 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 TMTC2Q8N394 836 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 METTL25Q8N6Q8 603 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 FAM71DQ8N9W8 422 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 ZNF548Q8NEK5 533 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 CTCFLQ8NI51 663 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 CD99L2Q8TCZ2 262 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 IPCEF1Q8WWN9 437 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 USP6NLQ92738 828 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 SNX21Q969T3 373 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 HIST1H2AAQ96QV6 131 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 PARK7Q99497 189 aaKnown RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 CINPQ9BW66 212 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 SLC26A6Q9BXS9 759 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 LRRC27Q9C0I9 530 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 FAM204AQ9H8W3 233 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 UPF2Q9HAU5 1272 aaKnown RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 RBM28Q9NW13 759 aaKnown RBP3.3□□□□□ -1.88
CSDE1-208ENST00000524652 SAGE1Q9NXZ1 904 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 SEMA5BQ9P283 1151 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 DNAJB11Q9UBS4 358 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 VPS51Q9UID3 782 aa3.3□□□□□ -1.88
CSDE1-208ENST00000524652 MID2Q9UJV3 735 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms