RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 CYP4F12Q9HCS2 524 aa11.98□□□□□ -0.49
PCDHGB6-201ENST00000520790 SCML2Q9UQR0 700 aa11.98□□□□□ -0.49
PCDHGB6-201ENST00000520790 ZBTB22O15209 634 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 NDUFB5O43674 189 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 CXCR2P25025 360 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 NEK3P51956 506 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 SLC20A2Q08357 652 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 KCNMA1Q12791 1236 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 PARP15Q460N3 678 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 TJAP1Q5JTD0 557 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 SLC30A9Q6PML9 568 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 SRRM1Q8IYB3 904 aaKnown RBP11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 JADE3Q92613 823 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 FAM83DQ9H4H8 585 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 MED4Q9NPJ6 270 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 GDF3Q9NR23 364 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 ERI2A8K979 691 aaKnown RBP11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 AP5Z1O43299 807 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 SYPP08247 313 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 MMP8P22894 467 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 CAV1Q03135 178 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 TOMM20Q15388 145 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 FIGNQ5HY92 759 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 DGKKQ5KSL6 1271 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 TMEFF1Q8IYR6 380 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 Q8N9G6 341 aaPredicted RBP11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 TEKT4Q8WW24 435 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 CYTH2Q99418 400 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 COPS8Q99627 209 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 NLNQ9BYT8 704 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 AVENQ9NQS1 362 aaPredicted RBP11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 PSMD13Q9UNM6 376 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 SMCHD1A6NHR9 2005 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 EDDM13A0A1B0GTR0 161 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 CDH3P22223 829 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 ABRQ12979 859 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 E4F1Q66K89 784 aaPredicted RBP11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 CAMK1DQ8IU85 385 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 PRSS58Q8IYP2 241 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 PANX3Q96QZ0 392 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 EXO5Q9H790 373 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 RAD18Q9NS91 495 aa11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 GPN3Q9UHW5 284 aaPredicted RBP11.97□□□□□ -0.49
PCDHGB6-201ENST00000520790 STAU1O95793 577 aaKnown RBP11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 CATP04040 527 aaKnown RBP11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 FMO4P31512 558 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 POU4F1Q01851 419 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 DMTNQ08495 405 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 C1orf61Q13536 156 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 PKN3Q6P5Z2 889 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 C2orf73Q8N5S3 287 aaPredicted RBP11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 ZNF614Q8N883 585 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 HMCESQ96FZ2 354 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 RTP3Q9BQQ7 232 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 KCNK12Q9HB15 430 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 SLC2A4RGQ9NR83 387 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 DRG1Q9Y295 367 aaKnown RBP11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 CIB2O75838 187 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 LAMP2P13473 410 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 NR2C2P49116 596 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 CARD16Q5EG05 197 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 LRRTM3Q86VH5 581 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 XYLT1Q86Y38 959 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 TMCO5AQ8N6Q1 288 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 C3orf58Q8NDZ4 430 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 FOXJ1Q92949 421 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 VAT1Q99536 393 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 GIMAP4Q9NUV9 329 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 DNMT3BQ9UBC3 853 aaKnown RBP11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 TLR6Q9Y2C9 796 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 CABIN1Q9Y6J0 2220 aa11.96□□□□□ -0.49
PCDHGB6-201ENST00000520790 KHNYNO15037 678 aaKnown RBP11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 OPHN1O60890 802 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 SEC24AO95486 1093 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 ALOX15P16050 662 aaPredicted RBP11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 DRD1P21728 446 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 MAOBP27338 520 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 PSMB4P28070 264 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 FAM78AQ5JUQ0 283 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 MROH9Q5TGP6 573 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 C4orf22Q6V702 233 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 LACRTQ9GZZ8 138 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 SSC5DA1L4H1 1573 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 FAM86C2PA6NEL3 165 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 OR2AG2A6NM03 316 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 PHF2O75151 1096 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 SESN3P58005 492 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 BTKQ06187 659 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 ZNF470Q6ECI4 717 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 ADGRD2Q7Z7M1 963 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 PHF13Q86YI8 300 aaPredicted RBP11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 TBL1YQ9BQ87 522 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 DMAC2Q9NW81 257 aa11.96□□□□□ -0.5
PCDHGB6-201ENST00000520790 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
PCDHGB6-201ENST00000520790 MMP20O60882 483 aa11.95□□□□□ -0.5
PCDHGB6-201ENST00000520790 SDC3O75056 442 aa11.95□□□□□ -0.5
PCDHGB6-201ENST00000520790 GNPDA1P46926 289 aa11.95□□□□□ -0.5
PCDHGB6-201ENST00000520790 WNT3AP56704 352 aa11.95□□□□□ -0.5
PCDHGB6-201ENST00000520790 DMC1Q14565 340 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms