RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 HS3ST3A1Q9Y663 406 aa8.43□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TCRBV5S1A1TA0A578 114 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 BICDL2A1A5D9 508 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ILVBLA1L0T0 632 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 GTPBP10A4D1E9 387 aaKnown RBP8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 YKT6O15498 198 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 DXOO77932 396 aaKnown RBP8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PCDH8O95206 1070 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TIMP2P16035 220 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ZNF18P17022 549 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 GM2AP17900 193 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 WT1P19544 449 aaPredicted RBP8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 L1CAMP32004 1257 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 LSSP48449 732 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 HDAC4P56524 1084 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 GABREP78334 506 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ATP11AP98196 1134 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 FMO1Q01740 532 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 GNA12Q03113 381 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 DEUP1Q05D60 604 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 MAPK8IP2Q13387 824 aaPredicted RBP8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 STIM1Q13586 685 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 INAVAQ3KP66 663 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CARD16Q5EG05 197 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ARHGAP40Q5TG30 622 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 KIAA1614Q5VZ46 1190 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NAA35Q5VZE5 725 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NEK5Q6P3R8 708 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ENOSF1Q7L5Y1 443 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TMPRSS9Q7Z410 1059 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SETD3Q86TU7 594 aaPredicted RBP8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CREBRFQ8IUR6 639 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TP53INP2Q8IXH6 220 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 EXD3Q8N9H8 876 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SLC30A5Q8TAD4 765 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 IFI44Q8TCB0 444 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 EPS8L1Q8TE68 723 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CENPIQ92674 756 aaPredicted RBP8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ARHGEF2Q92974 986 aaKnown RBP8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 VCPIP1Q96JH7 1222 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 LRRC61Q9BV99 259 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 BOCQ9BWV1 1114 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 GANQ9H2C0 597 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NLGN3Q9NZ94 848 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 IL36AQ9UHA7 158 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SLC12A6Q9UHW9 1150 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NOTCH2Q04721 2471 aa8.42□□□□□ -1.06
SCARNA20.3-201ENST00000516913 DOCK4Q8N1I0 1966 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 A0A1W2PQM1 296 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CPED1A4D0V7 1026 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 GOLGA6L4A6NEF3 574 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 C2CD4BA6NLJ0 364 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CDRT15L2A8MXV6 281 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 C1QTNF3-AMACRE9PGA6 284 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 YY2O15391 372 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 BUB1BO60566 1050 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 MMP20O60882 483 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 LRIG2O94898 1065 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CYP1A1P04798 512 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PRKCGP05129 697 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ITGB7P26010 798 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 OR1E1P30953 314 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ADRA1BP35368 520 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 HNF1BP35680 557 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NNMTP40261 264 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 RGRP47804 291 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 DNA2P51530 1060 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 OGDHQ02218 1023 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PTK2Q05397 1052 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CETN1Q12798 172 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PTPRRQ15256 657 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CYTH1Q15438 398 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TGIF1Q15583 401 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 VWA3BQ502W6 1294 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 BRMS1LQ5PSV4 323 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 FAM102AQ5T9C2 384 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 KYAT3Q6YP21 454 aaKnown RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 EFL1Q7Z2Z2 1120 aaKnown RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 GPR155Q7Z3F1 870 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PTAR1Q7Z6K3 402 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 DSG4Q86SJ6 1040 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 DNAAF5Q86Y56 855 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 CCDC117Q8IWD4 279 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 OXR1Q8N573 874 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 ARFGAP1Q8N6T3 406 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 TP53I13Q8NBR0 393 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 PTCD2Q8WV60 388 aaKnown RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SNRNP27Q8WVK2 155 aaKnown RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 RXFP2Q8WXD0 754 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SKA1Q96BD8 255 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 C18orf8Q96DM3 657 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SLC46A1Q96NT5 459 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 LENG8Q96PV6 779 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 HAPLN3Q96S86 360 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 HEPHQ9BQS7 1158 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 C2orf49Q9BVC5 232 aaPredicted RBP8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 NDST4Q9H3R1 872 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 DNAI1Q9UI46 699 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 SATB2Q9UPW6 733 aa8.41□□□□□ -1.06
SCARNA20.3-201ENST00000516913 COQ6Q9Y2Z9 468 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms