RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ZDHHC9Q9Y397 364 aa3.76□□□□□ -1.81
HMGB1P22-201ENST00000505315 A0A1W2PRX2 142 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 C3orf70A6NLC5 250 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 ENO4A6NNW6 628 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 CDRT15L2A8MXV6 281 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 TRIAP1O43715 76 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 PEX11AO75192 247 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 RTN2O75298 545 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 CRCPO75575 148 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 RECQL4O94761 1208 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 TRUB2O95900 331 aaKnown RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 CYP1A1P04798 512 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 CSF1RP07333 972 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 CCDC192P0DO97 292 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 GNAT2P19087 354 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 CASTP20810 708 aaKnown RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 IL10P22301 178 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 PRPH2P23942 346 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 PON1P27169 355 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 PPIFP30405 207 aaKnown RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 HOXA11P31270 313 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 GDNFP39905 211 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 EPHB4P54760 987 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 FOXL2P58012 376 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 TUBB4BP68371 445 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 TIAL1Q01085 375 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 FPGSQ05932 587 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 ACSM2AQ08AH3 577 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 MTAPQ13126 283 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 CAPSQ13938 189 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 KCNC3Q14003 757 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 RRS1Q15050 365 aaKnown RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 INAQ16352 499 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 SNAPC1Q16533 368 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 MEP1BQ16820 701 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 COL28A1Q2UY09 1125 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 MYLK3Q32MK0 819 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 MAJINQ3KP22 176 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 FBXO43Q4G163 708 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 AASDHQ4L235 1098 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 SLC39A12Q504Y0 691 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 FBLN7Q53RD9 439 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 ZMAT1Q5H9K5 638 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 FAM90A2PQ658T7 463 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 ACSM2BQ68CK6 577 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 JADE1Q6IE81 842 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 GRHL2Q6ISB3 625 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 Q6ZNB5 142 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 TOM1L2Q6ZVM7 507 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 KCTD9Q7L273 389 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 MIER3Q7Z3K6 550 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 RNF144BQ7Z419 303 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 PLEKHH3Q7Z736 793 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 FAM83AQ86UY5 434 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 CAND1Q86VP6 1230 aaKnown RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 TDRPQ86YL5 185 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 RTL3Q8N8U3 475 aaKnown RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 NHLRC2Q8NBF2 726 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 XXYLT1Q8NBI6 393 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 SRFBP1Q8NEF9 429 aaKnown RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 DENND6BQ8NEG7 585 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 TSPAN14Q8NG11 270 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 POC1BQ8TC44 478 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 ZCCHC14Q8WYQ9 949 aaKnown RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 CORO2AQ92828 525 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 FAM111AQ96PZ2 611 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 BBS4Q96RK4 519 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 GAL3ST4Q96RP7 486 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 GPHA2Q96T91 129 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 C12orf65Q9H3J6 166 aaKnown RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 C17orf75Q9HAS0 396 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 GCM1Q9NP62 436 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 SIRT3Q9NTG7 399 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 ZBTB40Q9NUA8 1239 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 SETD4Q9NVD3 440 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 HAO2Q9NYQ3 351 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 CWC15Q9P013 229 aaKnown RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 KIAA1456Q9P272 454 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 HEY2Q9UBP5 337 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 STX8Q9UNK0 236 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 AAR2Q9Y312 384 aaKnown RBP3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 AATKQ6ZMQ8 1374 aa3.75□□□□□ -1.81
HMGB1P22-201ENST00000505315 A0A1W2PQF6 199 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 A0A1W2PRG0 241 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 HTR3EA5X5Y0 456 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 DRGXA6NNA5 263 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 GRXCR1A8MXD5 290 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 USP17L23D6RBM5 183 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 PES1O00541 588 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 EIF3DO15371 548 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 TLR2O60603 784 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 MITFO75030 526 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 IPO13O94829 963 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 ZWINTO95229 277 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 IL1AP01583 271 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 MMP2P08253 660 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 ZNF888P0CJ79 500 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 PDHBP11177 359 aa3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 PKMP14618 531 aaKnown RBP3.74□□□□□ -1.81
HMGB1P22-201ENST00000505315 SLC2A4P14672 509 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms