RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ALPIP09923 528 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 LCP1P13796 627 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 CTSEP14091 401 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 TCN2P20062 427 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 TACR2P21452 398 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 NEK3P51956 506 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 PLK1P53350 603 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 COPB1P53618 953 aaKnown RBP12.77□□□□□ -0.37
LSM6-204ENST00000504181 DAOAP59103 153 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 GOLGA7BQ2TAP0 167 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 ARSIQ5FYB1 569 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 HID1Q8IV36 788 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 SLC4A11Q8NBS3 891 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 OR2A12Q8NGT7 310 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 IMPG2Q9BZV3 1241 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 NIF3L1Q9GZT8 377 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 INTS2Q9H0H0 1204 aaKnown RBP12.77□□□□□ -0.37
LSM6-204ENST00000504181 TFIP11Q9UBB9 837 aaKnown RBP12.77□□□□□ -0.37
LSM6-204ENST00000504181 ITGB1BP2Q9UKP3 347 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 KCTD3Q9Y597 815 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 SRCP12931 536 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 ADRB3P13945 408 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 GLB1P16278 677 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 IGFALSP35858 605 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 TXLNAP40222 546 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 SNRPFP62306 86 aaKnown RBP12.76□□□□□ -0.37
LSM6-204ENST00000504181 PRR30Q53SZ7 412 aaPredicted RBP12.76□□□□□ -0.37
LSM6-204ENST00000504181 ARHGAP17Q68EM7 881 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 CXorf57Q6NSI4 855 aaKnown RBP12.76□□□□□ -0.37
LSM6-204ENST00000504181 LVRNQ6Q4G3 990 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 MACC1Q6ZN28 852 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 PIM3Q86V86 326 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 GKN2Q86XP6 184 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 SFTPA2Q8IWL1 248 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 GPR156Q8NFN8 814 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 OR52K2Q8NGK3 314 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 TSACCQ96A04 125 aaPredicted RBP12.76□□□□□ -0.37
LSM6-204ENST00000504181 ALG14Q96F25 216 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 PPP1R16AQ96I34 528 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 CCDC114Q96M63 670 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 SLC4A5Q9BY07 1137 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 EDEM3Q9BZQ6 932 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 IL36AQ9UHA7 158 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 FADS3Q9Y5Q0 445 aa12.76□□□□□ -0.37
LSM6-204ENST00000504181 MRPS18BQ9Y676 258 aaKnown RBP12.76□□□□□ -0.37
LSM6-204ENST00000504181 H3BQV1 296 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 ATMINO43313 823 aaPredicted RBP12.75□□□□□ -0.37
LSM6-204ENST00000504181 LEFTY1O75610 366 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 MT-CO1P00395 513 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 LTFP02788 710 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 EIF4A3P38919 411 aaKnown RBP12.75□□□□□ -0.37
LSM6-204ENST00000504181 BLKP51451 505 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 HK3P52790 923 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 RAD23BP54727 409 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 MC1RQ01726 317 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 BST2Q10589 180 aaKnown RBP12.75□□□□□ -0.37
LSM6-204ENST00000504181 ARHGEF7Q14155 803 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 AMZ1Q400G9 498 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 NADK2Q4G0N4 442 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 FAM26FQ5R3K3 315 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 CERCAMQ5T4B2 595 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 CCDC73Q6ZRK6 1079 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 RD3Q7Z3Z2 195 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 VPS36Q86VN1 386 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 MCEMP1Q8IX19 187 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 TP53INP2Q8IXH6 220 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 C12orf56Q8IXR9 622 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 NLGN4XQ8N0W4 816 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 TTC13Q8NBP0 860 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 DENND6BQ8NEG7 585 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 NLGN4YQ8NFZ3 816 aaPredicted RBP12.75□□□□□ -0.37
LSM6-204ENST00000504181 SPG11Q96JI7 2443 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 CCDC74BQ96LY2 380 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 C5orf34Q96MH7 638 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 CLIC6Q96NY7 704 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 SERPINB11Q96P15 392 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 NUDT22Q9BRQ3 303 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 EFHD1Q9BUP0 239 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 DDA1Q9BW61 102 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 C1QTNF2Q9BXJ5 285 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 CNGB3Q9NQW8 809 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 SLC39A1Q9NY26 324 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 MAP10Q9P2G4 905 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 LRIT1Q9P2V4 623 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 KCND3Q9UK17 655 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 VPS28Q9UK41 221 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 TLK1Q9UKI8 766 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 PILRAQ9UKJ1 303 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 TSPAN16Q9UKR8 245 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 TLR6Q9Y2C9 796 aa12.75□□□□□ -0.37
LSM6-204ENST00000504181 IGHV5-10-1A0A0J9YXX1 117 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 F5H5T6 163 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 K7ERQ8 282 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 HGSO14964 777 aaPredicted RBP12.74□□□□□ -0.37
LSM6-204ENST00000504181 RFPL1O75677 317 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 CPNE6O95741 557 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 PNLIPP16233 465 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 RRM1P23921 792 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 NYAP1Q6ZVC0 841 aa12.74□□□□□ -0.37
LSM6-204ENST00000504181 NRSN1Q8IZ57 195 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms