RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ITGB7P26010 798 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 MSNP26038 577 aaKnown RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 SDC4P31431 198 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 GGCXP38435 758 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 EIF4A3P38919 411 aaKnown RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 MAPKAPK2P49137 400 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 SERPINH1P50454 418 aaKnown RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 DUSP3P51452 185 aaPredicted RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 HNRNPKP61978 463 aaKnown RBP eCLIP10.56□□□□□ -0.72
TTC28-207ENST00000490475 RPL7AP62424 266 aaKnown RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 RPS21P63220 83 aaKnown RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 POLD3Q15054 466 aaPredicted RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 SHBQ15464 509 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 CDO1Q16878 200 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 ALFQ53S48 1182 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 TDRD12Q587J7 1177 aaKnown RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 PIP5KL1Q5T9C9 394 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 DNAJC24Q6P3W2 148 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 FBXL19Q6PCT2 694 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 LRRC69Q6ZNQ3 347 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 TMC6Q7Z403 805 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 BNIPLQ7Z465 357 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 C14orf80Q86SX3 495 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 ZNF683Q8IZ20 524 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 C3orf20Q8ND61 904 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 OR8K1Q8NGG5 319 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 OR52K2Q8NGK3 314 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 RFFLQ8WZ73 363 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 VCPIP1Q96JH7 1222 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 PKNOX2Q96KN3 472 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 PSMB7Q99436 277 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 HEPHQ9BQS7 1158 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 MAGEB5Q9BZ81 275 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 ATP13A1Q9HD20 1204 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 HS3ST3A1Q9Y663 406 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 FASNP49327 2511 aaKnown RBP10.56□□□□□ -0.72
TTC28-207ENST00000490475 DOCK9Q9BZ29 2069 aa10.56□□□□□ -0.72
TTC28-207ENST00000490475 WDFY3Q8IZQ1 3526 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 A0A087X0T9 212 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 A0A1W2PQU0 124 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 ANKRD62A6NC57 917 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 H3BM21 787 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 TOR1BO14657 336 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 SLC31A1O15431 190 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 TSPAN6O43657 245 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 SNAP91O60641 907 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 SRGAP2O75044 1071 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 MT-CO1P00395 513 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 FAM228BP0C875 321 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 HNRNPH3P31942 346 aaKnown RBP10.55□□□□□ -0.72
TTC28-207ENST00000490475 L1CAMP32004 1257 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 ZNF75DP51815 510 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 GSCP56915 257 aaPredicted RBP10.55□□□□□ -0.72
TTC28-207ENST00000490475 TAS2R38P59533 333 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 DAB2P98082 770 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 GNA12Q03113 381 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 RAD51Q06609 339 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 BNIP3Q12983 259 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 TBX2Q13207 712 aaPredicted RBP10.55□□□□□ -0.72
TTC28-207ENST00000490475 MAMLD1Q13495 774 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 RTP5Q14D33 572 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 ZNF284Q2VY69 593 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 CARD16Q5EG05 197 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 PPP1R15BQ5SWA1 713 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 PRAMEF14Q5SWL7 426 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 HES3Q5TGS1 186 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 PPP1R2P3Q6NXS1 205 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 DCUN1D2Q6PH85 259 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 STRADAQ7RTN6 431 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 TFAP2DQ7Z6R9 452 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 PDZD3Q86UT5 571 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 FAM131BQ86XD5 332 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 SPATS2Q86XZ4 545 aaKnown RBP10.55□□□□□ -0.72
TTC28-207ENST00000490475 DRC7Q8IY82 874 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 OR4C6Q8NH72 309 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 CASKIN2Q8WXE0 1202 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 ASB12Q8WXK4 309 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 CENPIQ92674 756 aaPredicted RBP10.55□□□□□ -0.72
TTC28-207ENST00000490475 MCEEQ96PE7 176 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 DNAJC7Q99615 494 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 SPON2Q9BUD6 331 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 OSBPL1AQ9BXW6 950 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 ISCUQ9H1K1 167 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 OSBPL2Q9H1P3 480 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 MAGEH1Q9H213 219 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 MPP6Q9NZW5 540 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 OR12D3Q9UGF7 316 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 RAXQ9Y2V3 346 aa10.55□□□□□ -0.72
TTC28-207ENST00000490475 CHD5Q8TDI0 1954 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 A0A0D9SEW6 157 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 EIF4E1BA6NMX2 242 aaKnown RBP10.54□□□□□ -0.72
TTC28-207ENST00000490475 WNT9AO14904 365 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 LEFTY1O75610 366 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 GP1BAP07359 652 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 CTSLP07711 333 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 ADRB3P13945 408 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 RHOQP17081 205 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 GPD1P21695 349 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 DGKAP23743 735 aa10.54□□□□□ -0.72
TTC28-207ENST00000490475 ADRA1BP35368 520 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms