RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ANO6Q4KMQ2 910 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 INO80DQ53TQ3 878 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 PPP1R2P3Q6NXS1 205 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 SLFN11Q7Z7L1 901 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 ZSCAN30Q86W11 494 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 GATAD2AQ86YP4 633 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 UMODL1-AS1Q8N2C9 162 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 ARFGAP1Q8N6T3 406 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 RTL3Q8N8U3 475 aaKnown RBP9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 FAM174AQ8TBP5 190 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 IFT43Q96FT9 208 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 PCMTD1Q96MG8 357 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 HS3ST6Q96QI5 342 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 SELENOOQ9BVL4 669 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 C1QTNF2Q9BXJ5 285 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 KLHL11Q9NVR0 708 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 TAS2R14Q9NYV8 317 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 FZD10Q9ULW2 581 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 ACTL7AQ9Y615 435 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 HS3ST3A1Q9Y663 406 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 TRPM6Q9BX84 2022 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 ZFYVE26Q68DK2 2539 aa9.9□□□□□ -0.83
TMEM39A-210ENST00000490099 CFAP47Q6ZTR5 3102 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 TMEM191CA6NGB0 347 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 ZSCAN5CA6NGD5 496 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 SMTNL1A8MU46 457 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 EIF3CLB5ME19 914 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 AREL1O15033 823 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 SLC31A1O15431 190 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 SPINT1O43278 529 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 CCP110O43303 1012 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 BNIP3LO60238 219 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 RAMP2O60895 175 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 GSRP00390 522 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 GIMD1P0DJR0 217 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 CDK4P11802 303 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 ADRB3P13945 408 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 HNRNPA2B1P22626 353 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 HTR7P34969 479 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 ZNF165P49910 485 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 NEK3P51956 506 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 IL9RQ01113 521 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 BNIP3Q12983 259 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 POLD3Q15054 466 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 MYLK3Q32MK0 819 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 ZNF805Q5CZA5 627 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 FIGNQ5HY92 759 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 E4F1Q66K89 784 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 RWDD4Q6NW29 188 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 DNAJC24Q6P3W2 148 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 CACTIN-AS1Q8N1I8 211 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 PYROXD2Q8N2H3 581 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 SLC25A45Q8N413 288 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 ZNF454Q8N9F8 522 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 OR2AP1Q8NGE2 309 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 FNIP1Q8TF40 1166 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 CASKIN2Q8WXE0 1202 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 ZCCHC14Q8WYQ9 949 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 RAB7BQ96AH8 199 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 KLHDC7BQ96G42 594 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 PPP1R16AQ96I34 528 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 BMFQ96LC9 184 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 NAP1L5Q96NT1 182 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 LENG8Q96PV6 779 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 KLF6Q99612 283 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 EIF3CQ99613 913 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 EPAS1Q99814 870 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 ANP32EQ9BTT0 268 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 SLC17A9Q9BYT1 436 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 KLC2Q9H0B6 622 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 HECAQ9UBI9 543 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 DNAI1Q9UI46 699 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 CA5BQ9Y2D0 317 aa9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 FCF1Q9Y324 198 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 URB1O60287 2271 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-210ENST00000490099 SPEGQ15772 3267 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 DDX3XO00571 662 aaKnown RBP eCLIP9.88□□□□□ -0.832e-10■■■■□ 21.8
TMEM39A-210ENST00000490099 ENC1O14682 589 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 TSPAN6O43657 245 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 LDOC1O95751 146 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 ITGAVP06756 1048 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 PRLRP16471 622 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 TNFAIP3P21580 790 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 EPHB2P29323 1055 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 PBX1P40424 430 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 ACADVLP49748 655 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 RPS21P63220 83 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 ILKQ13418 452 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 SERINC3Q13530 473 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 PROX2Q3B8N5 592 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 PARP15Q460N3 678 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 EFHC2Q5JST6 749 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 AFMIDQ63HM1 303 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 SEL1L3Q68CR1 1132 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 KIAA1161Q6NSJ0 714 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 GCNT7Q6ZNI0 430 aa9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 CYP4V2Q6ZWL3 525 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 PARS2Q7L3T8 475 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 ZNF571Q7Z3V5 609 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-210ENST00000490099 TMPRSS12Q86WS5 348 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms