RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 MFSD4AQ8N468 514 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 NAT8LQ8N9F0 302 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC2A14Q8TDB8 520 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 LRTOMTQ8WZ04 291 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 SNX19Q92543 992 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 FIG4Q92562 907 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 HAS1Q92839 578 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 DCPSQ96C86 337 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 SLC39A13Q96H72 371 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CNDP1Q96KN2 507 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF778Q96MU6 729 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 KLHL32Q96NJ5 620 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 CSF3RQ99062 836 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 FAM118BQ9BPY3 351 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 BCL7BQ9BQE9 202 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 MTG1Q9BT17 334 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 SEMA6AQ9H2E6 1030 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 EFCAB1Q9HAE3 211 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 WDR6Q9NNW5 1121 aaKnown RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 HOMER2Q9NSB8 354 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 C20orf96Q9NUD7 363 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 GIMAP4Q9NUV9 329 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 DMAC2Q9NW81 257 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 UBP1Q9NZI7 540 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 MTRRQ9UBK8 725 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF229Q9UJW7 825 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 DNPEPQ9ULA0 475 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 PCDHAC2Q9Y5I4 1007 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 MAU2Q9Y6X3 613 aa4.83□□□□□ -1.64
SNRNP40-206ENST00000489853 UBE4BO95155 1302 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TJP1Q07157 1748 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CENPXA8MT69 81 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CYB561D2O14569 222 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 EIF3DO15371 548 aaKnown RBP eCLIP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PAPSS1O43252 624 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 EDIL3O43854 480 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 KCNJ13O60928 360 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 XYLBO75191 536 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 BCAS1O75363 584 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 BANF1O75531 89 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TOM1L1O75674 476 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 RFPL1O75677 317 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ZMPSTE24O75844 475 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 DNAJB5O75953 348 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 KCNH1O95259 989 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TDP2O95551 362 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SERPINE1P05121 402 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CAPN1P07384 714 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 GARTP22102 1010 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CFL1P23528 166 aaKnown RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 RPL10P27635 214 aaKnown RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PIK3R1P27986 724 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CD40LGP29965 261 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PSMD8P48556 350 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SERPINB10P48595 397 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PPP5CP53041 499 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MLLT6P55198 1093 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 FCGRTP55899 365 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ART3Q13508 389 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 BFSP2Q13515 415 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PEX6Q13608 980 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TRIM25Q14258 630 aaKnown RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 GALNT3Q14435 633 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TAF5Q15542 800 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 VPS72Q15906 364 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 BBS9Q3SYG4 887 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 C5orf22Q49AR2 442 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CEP55Q53EZ4 464 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CCNYL2Q5T2Q4 361 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 FAM182BQ5T319 152 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 AGAP9Q5VTM2 703 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MBLAC2Q68D91 279 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PLA2G4FQ68DD2 849 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ZNF773Q6PK81 442 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 EPGNQ6UW88 154 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 TIFABQ6ZNK6 161 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MAVSQ7Z434 540 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CAND1Q86VP6 1230 aaKnown RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 SFRP1Q8N474 314 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 FAM109AQ8N4B1 249 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 BEND7Q8N7W2 519 aaPredicted RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 PIK3C3Q8NEB9 887 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 BEST2Q8NFU1 509 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 OR6Q1Q8NGQ2 317 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CPT1BQ92523 772 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CDKL2Q92772 493 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ATP6V1E2Q96A05 226 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 HDAC11Q96DB2 347 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ASB9Q96DX5 294 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 FAM89AQ96GI7 184 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 METTL2AQ96IZ6 378 aaKnown RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MAP6Q96JE9 813 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 CEP19Q96LK0 163 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 DEPDC7Q96QD5 511 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 MMP19Q99542 508 aa4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 WDR83Q9BRX9 315 aaKnown RBP4.82□□□□□ -1.64
SNRNP40-206ENST00000489853 ADI1Q9BV57 179 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms