RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 LSMEM2Q8N112 164 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 CIB1Q99828 191 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 APOL2Q9BQE5 337 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 TASP1Q9H6P5 420 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 RAP2CQ9Y3L5 183 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 COL1A2P08123 1366 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 KCNU1A8MYU2 1149 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 YBX3P16989 372 aaKnown RBP eCLIP13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 AVPR1AP37288 418 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 MATKP42679 507 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 ENTPD1P49961 510 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 NAB1Q13506 487 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 PTK2BQ14289 1009 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 ANKDD1AQ495B1 522 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 WSCD1Q658N2 575 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 CARM1Q86X55 608 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 TTC39CQ8N584 583 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 CPSF7Q8N684 471 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 RNF139Q8WU17 664 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 SLCO4A1Q96BD0 722 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 DRC3Q9H069 523 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 TMEM165Q9HC07 324 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 GMPR2Q9P2T1 348 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 SLC39A10Q9ULF5 831 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 C9IYK1 514 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 E7ENX8 843 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 M0QYT0 321 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 H6PDO95479 791 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 FYNP06241 537 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 TFPTP0C1Z6 253 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 ZFXP17010 805 aaPredicted RBP13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 ALDH3B2P48448 385 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 LILRA4P59901 499 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 CERCAMQ5T4B2 595 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 CYP2R1Q6VVX0 501 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 ERI1Q8IV48 349 aaKnown RBP13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 APPL2Q8NEU8 664 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 FNDC8Q8TC99 324 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 ZNF597Q96LX8 424 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 TMEM79Q9BSE2 394 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 TINF2Q9BSI4 451 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 EFCAB1Q9HAE3 211 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 EBF1Q9UH73 591 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 SNX13Q9Y5W8 968 aa13.49□□□□□ -0.25
PDZRN3-208ENST00000479530 CCL15-CCL14A0A0B4J2E2 113 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 BOLA2-SMG1P6H3BVE0 249 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 CKMT2P17540 419 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 HSPA13P48723 471 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 RPL34P49207 117 aaKnown RBP13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 CDK9P50750 372 aaKnown RBP13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 MAP3K7CLP57077 242 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 BEX3Q00994 111 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 ZNF460Q14592 562 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 CCL15Q16663 113 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 SLC25A52Q3SY17 297 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 ITPRIPL1Q6GPH6 555 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 GPRIN1Q7Z2K8 1008 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 ZDHHC17Q8IUH5 632 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 ALDH16A1Q8IZ83 802 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 B3GALNT2Q8NCR0 500 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 SLC7A14Q8TBB6 771 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 DLG3Q92796 817 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 RANBP9Q96S59 729 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 RHOBTB2Q9BYZ6 727 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 CHRAC1Q9NRG0 131 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 UBQLN1Q9UMX0 589 aaKnown RBP13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 CDYLQ9Y232 598 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 AP4S1Q9Y587 144 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 PCDHGA7Q9Y5G6 932 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 H3BNH8 94 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 TPH1P17752 444 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 ARL4AP40617 200 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 TXNL4AP83876 142 aaKnown RBP13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 GRM3Q14832 879 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 SNX17Q15036 470 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 SPANXN3Q5MJ09 141 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 ELMSAN1Q6PJG2 1045 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 PID1Q7Z2X4 250 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 SMG8Q8ND04 991 aaKnown RBP13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 HMGCLL1Q8TB92 370 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 LZICQ8WZA0 190 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 APBA2Q99767 749 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 OMDQ99983 421 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 NOL11Q9H8H0 719 aaKnown RBP13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 EIF2B3Q9NR50 452 aaKnown RBP13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 IARS2Q9NSE4 1012 aaKnown RBP13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 PADI4Q9UM07 663 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 DERAQ9Y315 318 aa13.48□□□□□ -0.25
PDZRN3-208ENST00000479530 CCNA1P78396 465 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 LIPMQ5VYY2 423 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 HMBOX1Q6NT76 420 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 ZNF554Q86TJ5 538 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 KCTD4Q8WVF5 259 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 VPS39Q96JC1 886 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 PTPN18Q99952 460 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 NAT9Q9BTE0 207 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 DCUN1D5Q9BTE7 237 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 C1QTNF1Q9BXJ1 281 aa13.47□□□□□ -0.25
PDZRN3-208ENST00000479530 TRPV6Q9H1D0 765 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms