RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 ZNF513Q8N8E2 541 aaPredicted RBP17.16■□□□□ 0.34
EPHB4-204ENST00000477446 SLC35B2Q8TB61 432 aa17.16■□□□□ 0.34
EPHB4-204ENST00000477446 USP33Q8TEY7 942 aa17.16■□□□□ 0.34
EPHB4-204ENST00000477446 TLCD1Q96CP7 247 aa17.16■□□□□ 0.34
EPHB4-204ENST00000477446 RPL10LQ96L21 214 aaKnown RBP17.16■□□□□ 0.34
EPHB4-204ENST00000477446 THAP10Q9P2Z0 257 aaPredicted RBP17.16■□□□□ 0.34
EPHB4-204ENST00000477446 SAE1Q9UBE0 346 aaPredicted RBP17.16■□□□□ 0.34
EPHB4-204ENST00000477446 DNPEPQ9ULA0 475 aa17.16■□□□□ 0.34
EPHB4-204ENST00000477446 PLA2G4CQ9UP65 541 aa17.16■□□□□ 0.34
EPHB4-204ENST00000477446 ERVW-1Q9UQF0 538 aa17.16■□□□□ 0.34
EPHB4-204ENST00000477446 MUC22E2RYF6 1773 aaPredicted RBP17.16■□□□□ 0.34
EPHB4-204ENST00000477446 DNALI1O14645 258 aaPredicted RBP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 TP73O15350 636 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 NCAM2O15394 837 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 AGTP01019 485 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 HNRNPLP14866 589 aaKnown RBP eCLIP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 TGM2P21980 687 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 MDH1P40925 334 aaKnown RBP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 STK19P49842 368 aaPredicted RBP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 PPP2R2AP63151 447 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 MRPS21P82921 87 aaKnown RBP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 IZUMO3Q5VZ72 239 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 HIBCHQ6NVY1 386 aaPredicted RBP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 LINGO4Q6UY18 593 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 Q6ZS52 159 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 KCNV2Q8TDN2 545 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 CLDN23Q96B33 292 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 MRGPRX3Q96LB0 322 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 ACOX2Q99424 681 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 PCDH9Q9HC56 1237 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 BCCIPQ9P287 314 aaKnown RBP eCLIP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 NOVA2Q9UNW9 492 aaKnown RBP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 SHROOM3Q8TF72 1996 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 J3KR12 359 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 PI15O43692 258 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 TTC4O95801 387 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 MT-CO1P00395 513 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 DCNP07585 359 aaKnown RBP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 PECAM1P16284 738 aaPredicted RBP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 GALNT2Q10471 571 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 ZNF234Q14588 700 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 MORF4L2Q15014 288 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 CCDC25Q86WR0 208 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 IL17RCQ8NAC3 791 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 RPLP0P6Q8NHW5 317 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 P3H4Q92791 437 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 HAUS1Q96CS2 278 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 MYO19Q96H55 970 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 CCDC77Q9BR77 488 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 PHACTR1Q9C0D0 580 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 IPO11Q9UI26 975 aaKnown RBP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 SLCO3A1Q9UIG8 710 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 SLC25A13Q9UJS0 675 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 TPX2Q9ULW0 747 aaKnown RBP17.15■□□□□ 0.34
EPHB4-204ENST00000477446 ACTL7AQ9Y615 435 aa17.15■□□□□ 0.34
EPHB4-204ENST00000477446 WASH3PC4AMC7 463 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 APOC4-APOC2K7ER74 178 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 RASGRF2O14827 1237 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 RGS16O15492 202 aaPredicted RBP17.14■□□□□ 0.33
EPHB4-204ENST00000477446 MAFKO60675 156 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 TCEA3O75764 348 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 CD160O95971 181 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 APOC2P02655 101 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 SRPRAP08240 638 aaKnown RBP17.14■□□□□ 0.33
EPHB4-204ENST00000477446 ATP5DP30049 168 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 GARSP41250 739 aaKnown RBP17.14■□□□□ 0.33
EPHB4-204ENST00000477446 RPS9P46781 194 aaKnown RBP17.14■□□□□ 0.33
EPHB4-204ENST00000477446 NR2C2P49116 596 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 TRIP13Q15645 432 aaPredicted RBP17.14■□□□□ 0.33
EPHB4-204ENST00000477446 RETSATQ6NUM9 610 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 PKN3Q6P5Z2 889 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 CHPFQ8IZ52 775 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 ZCCHC9Q8N567 271 aaKnown RBP17.14■□□□□ 0.33
EPHB4-204ENST00000477446 LRRN4Q8WUT4 740 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 PBXIP1Q96AQ6 731 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 SERPINB12Q96P63 405 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 CDC42EP4Q9H3Q1 356 aaKnown RBP17.14■□□□□ 0.33
EPHB4-204ENST00000477446 PDFQ9HBH1 243 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 HS3ST2Q9Y278 367 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 RAD54BQ9Y620 910 aa17.14■□□□□ 0.33
EPHB4-204ENST00000477446 K7ERQ8 282 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 NPC1O15118 1278 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 PRAMEF11O60813 436 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 KLF8O95600 359 aaPredicted RBP17.13■□□□□ 0.33
EPHB4-204ENST00000477446 AOC1P19801 751 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 MX2P20592 715 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 STIP1P31948 543 aaKnown RBP17.13■□□□□ 0.33
EPHB4-204ENST00000477446 IL12RB1P42701 662 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 CLCN5P51795 746 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 HNRNPH2P55795 449 aaKnown RBP17.13■□□□□ 0.33
EPHB4-204ENST00000477446 ST8SIA6P61647 398 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 SLC20A2Q08357 652 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 GAS6Q14393 721 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 P3H1Q32P28 736 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 FNDC3BQ53EP0 1204 aaKnown RBP17.13■□□□□ 0.33
EPHB4-204ENST00000477446 DNAJC21Q5F1R6 531 aaKnown RBP17.13■□□□□ 0.33
EPHB4-204ENST00000477446 SERPINA13PQ6UXR4 307 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 BMP8AQ7Z5Y6 402 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 LRRC49Q8IUZ0 686 aa17.13■□□□□ 0.33
EPHB4-204ENST00000477446 ATPAF2Q8N5M1 289 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms