RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 RBM7Q9Y580 266 aaKnown RBP18.77■□□□□ 0.59
VARS2-209ENST00000477288 GSAPA4D1B5 854 aa18.77■□□□□ 0.59
VARS2-209ENST00000477288 CCDC85CA6NKD9 419 aa18.77■□□□□ 0.59
VARS2-209ENST00000477288 SLC34A1Q06495 639 aa18.77■□□□□ 0.59
VARS2-209ENST00000477288 NYAP1Q6ZVC0 841 aa18.77■□□□□ 0.59
VARS2-209ENST00000477288 EEF1AKMT1Q8WVE0 214 aa18.77■□□□□ 0.59
VARS2-209ENST00000477288 PDCD10Q9BUL8 212 aa18.77■□□□□ 0.59
VARS2-209ENST00000477288 NINJ2Q9NZG7 142 aa18.77■□□□□ 0.59
VARS2-209ENST00000477288 HES2Q9Y543 173 aa18.77■□□□□ 0.59
VARS2-209ENST00000477288 H7C0S8 307 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 NOMO2Q5JPE7 1267 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 BHLHE22Q8NFJ8 381 aaPredicted RBP18.76■□□□□ 0.59
VARS2-209ENST00000477288 DDX4Q9NQI0 724 aaKnown RBP18.76■□□□□ 0.59
VARS2-209ENST00000477288 SLC35C2Q9NQQ7 365 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 GSTK1Q9Y2Q3 226 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 ATXN2Q99700 1313 aaKnown RBP18.76■□□□□ 0.59
VARS2-209ENST00000477288 PNMA8CA0A1B0GUJ8 204 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 PSMD11O00231 422 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 TPP1O14773 563 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 GNRH1P01148 92 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 UBA1P22314 1058 aaKnown RBP18.76■□□□□ 0.59
VARS2-209ENST00000477288 PSMB4P28070 264 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 NOS2P35228 1153 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 C15orf59Q2T9L4 293 aaPredicted RBP18.76■□□□□ 0.59
VARS2-209ENST00000477288 WDR93Q6P2C0 686 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 SGTAO43765 313 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 SLC25A12O75746 678 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 FRG1Q14331 258 aaKnown RBP18.76■□□□□ 0.59
VARS2-209ENST00000477288 PARP6Q2NL67 630 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 MZT2AQ6P582 158 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 PIGUQ9H490 435 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 ATP13A3Q9H7F0 1226 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 FRMPD4Q14CM0 1322 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 CARNS1A5YM72 827 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 CXCR2P25025 360 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 CASP7P55210 303 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 TAB1Q15750 504 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 NRF1Q16656 503 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 WDR59Q6PJI9 974 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 TRAPPC9Q96Q05 1148 aa18.76■□□□□ 0.59
VARS2-209ENST00000477288 TNFAIP8O95379 198 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 INO80DQ53TQ3 878 aaPredicted RBP18.75■□□□□ 0.59
VARS2-209ENST00000477288 NPNTQ6UXI9 565 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 OR10G6Q8NH81 332 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 FUT8Q9BYC5 575 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 NUAK2Q9H093 628 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 DDX20Q9UHI6 824 aaKnown RBP18.75■□□□□ 0.59
VARS2-209ENST00000477288 SNX6Q9UNH7 406 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 HPSEQ9Y251 543 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 TNPO3Q9Y5L0 923 aaKnown RBP18.75■□□□□ 0.59
VARS2-209ENST00000477288 TMEM131LA2VDJ0 1609 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 EML1O00423 815 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 RARAP10276 462 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 CCT3P49368 545 aaKnown RBP18.75■□□□□ 0.59
VARS2-209ENST00000477288 SP3Q02447 781 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 FAAH2Q6GMR7 532 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 PARGQ86W56 976 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 KIAA0319LQ8IZA0 1049 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 ASB2Q96Q27 587 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 FERD3LQ96RJ6 166 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 PCDH12Q9NPG4 1184 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 TMEM138Q9NPI0 162 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 PIGNO95427 931 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 EIF4BP23588 611 aaKnown RBP18.75■□□□□ 0.59
VARS2-209ENST00000477288 TKTP29401 623 aaKnown RBP18.75■□□□□ 0.59
VARS2-209ENST00000477288 DPYSL3Q14195 570 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 OR52K1Q8NGK4 314 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 UBE2E3Q969T4 207 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 FAIM2Q9BWQ8 316 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 FBXO6Q9NRD1 293 aaPredicted RBP18.75■□□□□ 0.59
VARS2-209ENST00000477288 ETNK2Q9NVF9 386 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 SLIT1O75093 1534 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 FFAR3O14843 346 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 GPR42O15529 346 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 HTR1BP28222 390 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 MAP4K3Q8IVH8 894 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 GPN3Q9UHW5 284 aaPredicted RBP18.75■□□□□ 0.59
VARS2-209ENST00000477288 SLC12A4Q9UP95 1085 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 RIMS1Q86UR5 1692 aaKnown RBP18.75■□□□□ 0.59
VARS2-209ENST00000477288 TRUB2O95900 331 aaKnown RBP18.75■□□□□ 0.59
VARS2-209ENST00000477288 SAMD4BQ5PRF9 694 aaKnown RBP18.75■□□□□ 0.59
VARS2-209ENST00000477288 STXBP5Q5T5C0 1151 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 ATAD3AQ9NVI7 634 aa18.75■□□□□ 0.59
VARS2-209ENST00000477288 TLL1O43897 1013 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 ADH1AP07327 375 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 NPR3P17342 541 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 AP5B1Q2VPB7 878 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 NEPROQ6NW34 567 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 CCDC185Q8N715 623 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.74■□□□□ 0.59
VARS2-209ENST00000477288 COL3A1P02461 1466 aaPredicted RBP18.74■□□□□ 0.59
VARS2-209ENST00000477288 ISM1B1AKI9 464 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 TISP43B9A030 160 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 F8VP50 259 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 HMGB3O15347 200 aaKnown RBP18.74■□□□□ 0.59
VARS2-209ENST00000477288 CHKAP35790 457 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 WASHC2DQ5SRD0 308 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 PSTKQ8IV42 348 aaKnown RBP18.74■□□□□ 0.59
VARS2-209ENST00000477288 SLC25A23Q9BV35 468 aa18.74■□□□□ 0.59
VARS2-209ENST00000477288 PROCP04070 461 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms