RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ZMIZ2Q8NF64 920 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 DMBX1Q8NFW5 382 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 STYXQ8WUJ0 223 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 DEPDC1BQ8WUY9 529 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ATP2A3Q93084 1043 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 RNF34Q969K3 372 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 MFSD3Q96ES6 412 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 DYNLL2Q96FJ2 89 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 PITX2Q99697 317 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 FERMT1Q9BQL6 677 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SMOC2Q9H3U7 446 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 GPRC5CQ9NQ84 441 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SEPT11Q9NVA2 429 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 MED9Q9NWA0 146 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 TRNAU1APQ9NX07 287 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 DDX56Q9NY93 547 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 TAS2R7Q9NYW3 318 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 OPTCQ9UBM4 332 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 STAP1Q9ULZ2 295 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ERVW-1Q9UQF0 538 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 PTPN22Q9Y2R2 807 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 PLXNA2O75051 1894 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SFI1A8K8P3 1242 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 HAX1O00165 279 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 PFKMP08237 780 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 HOXD8P13378 290 aaPredicted RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 KDELR1P24390 212 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 HRH2P25021 359 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 RFC2P35250 354 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SERPINB5P36952 375 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SLC1A6P48664 564 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 PRKAA2P54646 552 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 CABP4P57796 275 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 NLRP11P59045 1033 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 SRP54P61011 504 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 CXCR4P61073 352 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 RGS21Q2M5E4 152 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 CELF3Q5SZQ8 465 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 OTUD1Q5VV17 481 aaPredicted RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 PDPK2PQ6A1A2 396 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 PADI6Q6TGC4 694 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 TMEM26Q6ZUK4 368 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 STRADAQ7RTN6 431 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 TRIM50Q86XT4 487 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 GPALPP1Q8IXQ4 340 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 LHFPL5Q8TAF8 219 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 TSPEARQ8WU66 669 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 NLRP7Q8WX94 980 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 NT5C3BQ969T7 300 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 GPR137Q96N19 417 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 EBNA1BP2Q99848 306 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 C1orf50Q9BV19 199 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 UGT2B28Q9BY64 529 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 WDR12Q9GZL7 423 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 XYLT2Q9H1B5 865 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 TP63Q9H3D4 680 aaPredicted RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 COG4Q9H9E3 785 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SACM1LQ9NTJ5 587 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 CCDC59Q9P031 241 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 BIN2Q9UBW5 565 aaPredicted RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 ARHGAP26Q9UNA1 814 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SNX13Q9Y5W8 968 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 IVNS1ABPQ9Y6Y0 642 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ILVBLA1L0T0 632 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 FAM25EA8MYX2 175 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 TPD52L2O43399 206 aaKnown RBP4.15□□□□□ -1.74
USP16-205ENST00000474835 CELF2O95319 508 aaKnown RBP4.15□□□□□ -1.74
USP16-205ENST00000474835 TRIM49P0CI25 452 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 TRIM49CP0CI26 452 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 GRK3P35626 688 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 ELK3P41970 407 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 EPS15P42566 896 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 GRIA4P48058 902 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 PPP5CP53041 499 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 C21orf59P57076 290 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 TAP1Q03518 808 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 MGAT3Q09327 533 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 ZNF846Q147U1 533 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 ANO4Q32M45 955 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 MTX3Q5HYI7 312 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 PPM1LQ5SGD2 360 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 C9orf131Q5VYM1 1079 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 ATG16L1Q676U5 607 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 XKR5Q6UX68 686 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 C4orf22Q6V702 233 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 RETREG3Q86VR2 466 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 EXOC8Q8IYI6 725 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 CMTR2Q8IYT2 770 aaKnown RBP4.15□□□□□ -1.74
USP16-205ENST00000474835 SNX31Q8N9S9 440 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 CHDHQ8NE62 594 aaPredicted RBP4.15□□□□□ -1.74
USP16-205ENST00000474835 FEZF2Q8TBJ5 459 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 PHOSPHO2Q8TCD6 241 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 CASP10Q92851 521 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 RPL3LQ92901 407 aaKnown RBP4.15□□□□□ -1.74
USP16-205ENST00000474835 FOXJ1Q92949 421 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 SH3KBP1Q96B97 665 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 KLHL15Q96M94 604 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 AMBRA1Q9C0C7 1298 aa4.15□□□□□ -1.74
USP16-205ENST00000474835 TNKS2Q9H2K2 1166 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms