RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SRSF6Q13247 344 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 AUHQ13825 339 aaKnown RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 TAF5Q15542 800 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 MEA1Q16626 185 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 KIAA1161Q6NSJ0 714 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 DENND1BQ6P3S1 775 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 FOXR1Q6PIV2 292 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 B3GNT8Q7Z7M8 397 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 TMEM110Q86TL2 294 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 PPM1KQ8N3J5 372 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 ATP11CQ8NB49 1132 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 CHST14Q8NCH0 376 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 WDR48Q8TAF3 677 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 LMO3Q8TAP4 145 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 GRIN3AQ8TCU5 1115 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 LMX1AQ8TE12 382 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 STK32AQ8WU08 396 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 EXTL1Q92935 676 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 NAT6Q93015 286 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 RNF34Q969K3 372 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 SGF29Q96ES7 293 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 LIN37Q96GY3 246 aaPredicted RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 MRGPRX2Q96LB1 330 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 CCDC114Q96M63 670 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 NT5C1BQ96P26 610 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 PPP1R9BQ96SB3 815 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 PSMB7Q99436 277 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 KLF6Q99612 283 aaPredicted RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 CCDC3Q9BQI4 270 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 C2orf49Q9BVC5 232 aaPredicted RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 SLC17A9Q9BYT1 436 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 MUC3BQ9H195 1237 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 TCEAL2Q9H3H9 227 aaPredicted RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 THAP9Q9H5L6 903 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 FAM204AQ9H8W3 233 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 DYRK4Q9NR20 520 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 DDIT4Q9NX09 232 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 ANKMY1Q9P2S6 941 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 ARMCX3Q9UH62 379 aaPredicted RBP5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 SLC12A6Q9UHW9 1150 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 VPS51Q9UID3 782 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 ACSL6Q9UKU0 697 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 CFAP45Q9UL16 551 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 VANGL2Q9ULK5 521 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 TBC1D30Q9Y2I9 924 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 PCDHGA7Q9Y5G6 932 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 FADS3Q9Y5Q0 445 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 WASF2Q9Y6W5 498 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 AKAP9Q99996 3911 aa5.24□□□□□ -1.57
SNRNP40-204ENST00000474025 RP1L1Q8IWN7 2480 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 CELSR1Q9NYQ6 3014 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 SYNJ2BP-COX16A0A087WUM0 186 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 A0A0D9SEW6 157 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 D6RAR5 112 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 NTN3O00634 580 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 AP1G1O43747 822 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 LEFTY1O75610 366 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 CNTN5O94779 1100 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 GJB6O95452 261 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 PAK4O96013 591 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 RHOCP08134 193 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 GLI1P08151 1106 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 FAM87AP0C7U9 286 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 ADRB3P13945 408 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 ITGB7P26010 798 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 SLC5A2P31639 672 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 PRCPP42785 496 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 NEK3P51956 506 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 CDH4P55283 916 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 PFN3P60673 137 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 KRT83P78385 493 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 CDK17Q00537 523 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 FKBP3Q00688 224 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 GCNT1Q02742 428 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 EIF2B5Q13144 721 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 EIF3IQ13347 325 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 PDCLQ13371 301 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 PDE1CQ14123 709 aaPredicted RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 UBAP2LQ14157 1087 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 SPIDRQ14159 915 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 TGIF1Q15583 401 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 C5orf22Q49AR2 442 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 C4orf17Q53FE4 359 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 ALFQ53S48 1182 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 COBLL1Q53SF7 1204 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 PRRT3Q5FWE3 981 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 C22orf39Q6P5X5 142 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 LINGO4Q6UY18 593 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 KRBA2Q6ZNG9 492 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 DPY19L3Q6ZPD9 716 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 USP53Q70EK8 1073 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 PARS2Q7L3T8 475 aaKnown RBP5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 RRAGAQ7L523 313 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 C14orf80Q86SX3 495 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 RETREG3Q86VR2 466 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 ARHGEF19Q8IW93 802 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 ZNF683Q8IZ20 524 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 RBFAQ8N0V3 343 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 FBXO39Q8N4B4 442 aa5.23□□□□□ -1.57
SNRNP40-204ENST00000474025 DCAF4L2Q8NA75 395 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms