RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 WDFY4Q6ZS81 3184 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 F5H423 210 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 MUSKO15146 869 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 POLR3GO15318 223 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 ZBTB24O43167 697 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 GCATO75600 419 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 HEXIM1O94992 359 aaKnown RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 ATP5BP06576 529 aaKnown RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 DLDP09622 509 aaKnown RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 RHOXF2BP0C7M4 288 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 SRCP12931 536 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 CD72P21854 359 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 HNRNPH1P31943 449 aaKnown RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 CD68P34810 354 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 GRIA2P42262 883 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 SERPINH1P50454 418 aaKnown RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 MAXP61244 160 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 IFT88Q13099 833 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 ZNF235Q14590 738 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 PON2Q15165 354 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 PTPRNQ16849 979 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 PREPLQ4J6C6 727 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 INO80DQ53TQ3 878 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 TAX1BP1Q86VP1 789 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 TRIM42Q8IWZ5 723 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 SH2D3CQ8N5H7 860 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 TEX26Q8N6G2 289 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 MYO19Q96H55 970 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 EXOC2Q96KP1 924 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 TEKT5Q96M29 485 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 VAT1Q99536 393 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 RHOXF2Q9BQY4 288 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 CINPQ9BW66 212 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 TRIM31Q9BZY9 425 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 FAM107BQ9H098 131 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 ZDHHC4Q9NPG8 344 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 ASIC3Q9UHC3 531 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 SLCO3A1Q9UIG8 710 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 SHISA7A6NL88 538 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 ATP8B1O43520 1251 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 OPHN1O60890 802 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 ZNF189O75820 626 aaPredicted RBP6.96□□□□□ -1.29
SCAF4-204ENST00000467731 APODP05090 189 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 RPL22P35268 128 aaKnown RBP6.96□□□□□ -1.29
SCAF4-204ENST00000467731 GEMIN4P57678 1058 aaKnown RBP6.96□□□□□ -1.29
SCAF4-204ENST00000467731 GPS1Q13098 491 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 PTK6Q13882 451 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 RFTN1Q14699 578 aaPredicted RBP6.96□□□□□ -1.29
SCAF4-204ENST00000467731 EIF4HQ15056 248 aaKnown RBP6.96□□□□□ -1.29
SCAF4-204ENST00000467731 CYTH1Q15438 398 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 SLC44A4Q53GD3 710 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 GLE1Q53GS7 698 aaKnown RBP6.96□□□□□ -1.29
SCAF4-204ENST00000467731 ARHGEF18Q6ZSZ5 1173 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 TPRG1Q6ZUI0 275 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 RNF135Q8IUD6 432 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 PGBD5Q8N414 524 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 EZH1Q92800 747 aaPredicted RBP6.96□□□□□ -1.29
SCAF4-204ENST00000467731 N4BP2L2Q92802 583 aaPredicted RBP6.96□□□□□ -1.29
SCAF4-204ENST00000467731 MRGPRX3Q96LB0 322 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 PSKH2Q96QS6 385 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 ERP44Q9BS26 406 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 EPC1Q9H2F5 836 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 PAK5Q9P286 719 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 SEPT3Q9UH03 358 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 PLA2G4CQ9UP65 541 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 ERVW-1Q9UQF0 538 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 UTP11Q9Y3A2 253 aaKnown RBP6.96□□□□□ -1.29
SCAF4-204ENST00000467731 CKAP5Q14008 2032 aa6.96□□□□□ -1.29
SCAF4-204ENST00000467731 CXorf51AA0A1B0GTR3 108 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 ESYT3A0FGR9 886 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 TTC24A2A3L6 582 aaPredicted RBP6.96□□□□□ -1.3
SCAF4-204ENST00000467731 EME2A4GXA9 379 aaPredicted RBP6.96□□□□□ -1.3
SCAF4-204ENST00000467731 FAM187AA6NFU0 413 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 ZNF821O75541 412 aaPredicted RBP6.96□□□□□ -1.3
SCAF4-204ENST00000467731 GJB3O75712 270 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 METTL18O95568 372 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 NFKB1P19838 968 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 PSMB4P28070 264 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 TPP2P29144 1249 aaPredicted RBP6.96□□□□□ -1.3
SCAF4-204ENST00000467731 RGRP47804 291 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 ITKQ08881 620 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 ERCC6LQ2NKX8 1250 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 ACCSLQ4AC99 568 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 TMEM196Q5HYL7 178 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 FAXCQ5TGI0 409 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 NUDT18Q6ZVK8 323 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 SYDE1Q6ZW31 735 aaPredicted RBP6.96□□□□□ -1.3
SCAF4-204ENST00000467731 GJD3Q8N144 294 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 BBS5Q8N3I7 341 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 ZNF366Q8N895 744 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 TM6SF2Q9BZW4 377 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 POLR1EQ9GZS1 481 aaKnown RBP6.96□□□□□ -1.3
SCAF4-204ENST00000467731 CD320Q9NPF0 282 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 TRHDEQ9UKU6 1024 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 HCN2Q9UL51 889 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 CA14Q9ULX7 337 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 ATP8A1Q9Y2Q0 1164 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 K7EQS6 105 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 ASLP04424 464 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 GLULP15104 373 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms