RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 TUSC3Q13454 348 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 ZNF423Q2M1K9 1284 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 GRAMD1BQ3KR37 738 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 PIGGQ5H8A4 983 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 LIPMQ5VYY2 423 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 SEL1L3Q68CR1 1132 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 TMC7Q7Z402 723 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 MARVELD2Q8N4S9 558 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 MOCOSQ96EN8 888 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 SERPINI1Q99574 410 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 IL22Q9GZX6 179 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 BRD8Q9H0E9 1235 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 IARS2Q9NSE4 1012 aaKnown RBP14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 DSEQ9UL01 958 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 ANKRD6Q9Y2G4 727 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 DTNAQ9Y4J8 743 aa14.94□□□□□ -0.02
PRPF38B-204ENST00000467302 ARHGEF37A1IGU5 675 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 TK2O00142 265 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 MTSS1O43312 755 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 ATP9BO43861 1147 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 INHAP05111 366 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 CKBP12277 381 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 EPHA3P29320 983 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 GRIA4P48058 902 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 THOP1P52888 689 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 PRKAA2P54646 552 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 NSUN2Q08J23 767 aaKnown RBP eCLIP14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 DYNC1I2Q13409 638 aaKnown RBP14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 GRM3Q14832 879 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 TLR1Q15399 786 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 ANO4Q32M45 955 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 ARL13AQ5H913 290 aaPredicted RBP14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 INTS6LQ5JSJ4 861 aaKnown RBP14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 ZNF598Q86UK7 904 aaKnown RBP14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 ZC3HC1Q86WB0 502 aaKnown RBP14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 TMEM126BQ8IUX1 230 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 SLAIN1Q8ND83 568 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 DPF3Q92784 378 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 HDAC11Q96DB2 347 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 ULBP1Q9BZM6 244 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 EPB41L1Q9H4G0 881 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 PACSIN3Q9UKS6 424 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 TRHDEQ9UKU6 1024 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 COMMD3-BMI1R4GMX3 469 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 C15orf38-AP3S2A0A0A6YYH1 394 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 TARM1B6A8C7 271 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 NRP1O14786 923 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 CYP11A1P05108 521 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 SMIM18P0DKX4 95 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 ADSLP30566 484 aaPredicted RBP14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 PPARGP37231 505 aaPredicted RBP14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 CCR10P46092 362 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 BRCC3P46736 316 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 RABGGTBP53611 331 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 TPI1P60174 286 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 GALNT2Q10471 571 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 CYLC2Q14093 348 aaPredicted RBP14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 PAN2Q504Q3 1202 aaKnown RBP14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 ARPINQ7Z6K5 226 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 TICAM1Q8IUC6 712 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 ZSCAN18Q8TBC5 510 aaPredicted RBP14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 DCUN1D1Q96GG9 259 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 SMARCD1Q96GM5 515 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 GCNAQ96QF7 691 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 CDRT15Q96T59 188 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 ACBD6Q9BR61 282 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 TASP1Q9H6P5 420 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 CNGB3Q9NQW8 809 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 ZDHHC2Q9UIJ5 367 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 FBXW11Q9UKB1 542 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 SLC39A10Q9ULF5 831 aa14.93□□□□□ -0.02
PRPF38B-204ENST00000467302 SMIM31A0A1B0GVY4 71 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 DNAJA2O60884 412 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 PIGNO95427 931 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 XRCC1P18887 633 aaPredicted RBP14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 NFKB1P19838 968 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 NMBRP28336 390 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 DAOAP59103 153 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 PRKAA1Q13131 559 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 LSAMPQ13449 338 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 HERC3Q15034 1050 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 RAB41Q5JT25 222 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 ZFP1Q6P2D0 407 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 BNC2Q6ZN30 1099 aaPredicted RBP14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 SETD3Q86TU7 594 aaPredicted RBP14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 LCA5Q86VQ0 697 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 LSMEM2Q8N112 164 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 SLC43A3Q8NBI5 491 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 ZMIZ2Q8NF64 920 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 ADAM32Q8TC27 787 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 STYXQ8WUJ0 223 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 NAT14Q8WUY8 206 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 APOL2Q9BQE5 337 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 RTP3Q9BQQ7 232 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 KIFC1Q9BW19 673 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 RHOJQ9H4E5 214 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 ACSS2Q9NR19 701 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 RGS18Q9NS28 235 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 VTI1BQ9UEU0 232 aa14.92□□□□□ -0.02
PRPF38B-204ENST00000467302 RIMS3Q9UJD0 308 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms