RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CARNMT1Q8N4J0 409 aa9.65□□□□□ -0.86
APP-213ENST00000464867 HJURPQ8NCD3 748 aaPredicted RBP9.65□□□□□ -0.86
APP-213ENST00000464867 WFDC5Q8TCV5 224 aa9.65□□□□□ -0.86
APP-213ENST00000464867 NKD1Q969G9 470 aa9.65□□□□□ -0.86
APP-213ENST00000464867 CALR3Q96L12 384 aaKnown RBP9.65□□□□□ -0.86
APP-213ENST00000464867 NOX5Q96PH1 765 aa9.65□□□□□ -0.86
APP-213ENST00000464867 DDX50Q9BQ39 737 aaKnown RBP9.65□□□□□ -0.86
APP-213ENST00000464867 CPEB1Q9BZB8 566 aaKnown RBP9.65□□□□□ -0.86
APP-213ENST00000464867 XYLT2Q9H1B5 865 aa9.65□□□□□ -0.86
APP-213ENST00000464867 VRTNQ9H8Y1 702 aa9.65□□□□□ -0.86
APP-213ENST00000464867 OLFML3Q9NRN5 406 aa9.65□□□□□ -0.86
APP-213ENST00000464867 NOP53Q9NZM5 478 aaKnown RBP9.65□□□□□ -0.86
APP-213ENST00000464867 GULP1Q9UBP9 304 aa9.65□□□□□ -0.86
APP-213ENST00000464867 GGT7Q9UJ14 662 aa9.65□□□□□ -0.86
APP-213ENST00000464867 PHTF1Q9UMS5 762 aa9.65□□□□□ -0.86
APP-213ENST00000464867 APCP25054 2843 aa9.65□□□□□ -0.86
APP-213ENST00000464867 TRPM6Q9BX84 2022 aa9.65□□□□□ -0.87
APP-213ENST00000464867 MED13LQ71F56 2210 aa9.64□□□□□ -0.87
APP-213ENST00000464867 WIPF3A6NGB9 483 aa9.64□□□□□ -0.87
APP-213ENST00000464867 ADARB2-AS1A8MUL3 147 aa9.64□□□□□ -0.87
APP-213ENST00000464867 C9orf172C9J069 976 aa9.64□□□□□ -0.87
APP-213ENST00000464867 LMO7DNF2Z398 122 aa9.64□□□□□ -0.87
APP-213ENST00000464867 CLDN1O95832 211 aa9.64□□□□□ -0.87
APP-213ENST00000464867 RNF224P0DH78 156 aa9.64□□□□□ -0.87
APP-213ENST00000464867 LIFP15018 202 aa9.64□□□□□ -0.87
APP-213ENST00000464867 SGSHP51688 502 aa9.64□□□□□ -0.87
APP-213ENST00000464867 COPB1P53618 953 aaKnown RBP9.64□□□□□ -0.87
APP-213ENST00000464867 ADKP55263 362 aaKnown RBP9.64□□□□□ -0.87
APP-213ENST00000464867 CCL7P80098 99 aa9.64□□□□□ -0.87
APP-213ENST00000464867 PSMD6Q15008 389 aa9.64□□□□□ -0.87
APP-213ENST00000464867 ZNF284Q2VY69 593 aa9.64□□□□□ -0.87
APP-213ENST00000464867 PIK3R6Q5UE93 754 aa9.64□□□□□ -0.87
APP-213ENST00000464867 RFWD3Q6PCD5 774 aa9.64□□□□□ -0.87
APP-213ENST00000464867 GCNT7Q6ZNI0 430 aa9.64□□□□□ -0.87
APP-213ENST00000464867 TIPARPQ7Z3E1 657 aaKnown RBP9.64□□□□□ -0.87
APP-213ENST00000464867 UNC45BQ8IWX7 931 aa9.64□□□□□ -0.87
APP-213ENST00000464867 SDR16C5Q8N3Y7 309 aa9.64□□□□□ -0.87
APP-213ENST00000464867 CPT1CQ8TCG5 803 aa9.64□□□□□ -0.87
APP-213ENST00000464867 RNF34Q969K3 372 aa9.64□□□□□ -0.87
APP-213ENST00000464867 KIAA1143Q96AT1 154 aaPredicted RBP9.64□□□□□ -0.87
APP-213ENST00000464867 RPL10LQ96L21 214 aaKnown RBP9.64□□□□□ -0.87
APP-213ENST00000464867 DUSP16Q9BY84 665 aa9.64□□□□□ -0.87
APP-213ENST00000464867 INTS2Q9H0H0 1204 aaKnown RBP9.64□□□□□ -0.87
APP-213ENST00000464867 CDH19Q9H159 772 aa9.64□□□□□ -0.87
APP-213ENST00000464867 LRRN3Q9H3W5 708 aa9.64□□□□□ -0.87
APP-213ENST00000464867 CAAP1Q9H8G2 361 aa9.64□□□□□ -0.87
APP-213ENST00000464867 DYRK4Q9NR20 520 aa9.64□□□□□ -0.87
APP-213ENST00000464867 INTS6Q9UL03 887 aaKnown RBP9.64□□□□□ -0.87
APP-213ENST00000464867 TP53TG5Q9Y2B4 290 aa9.64□□□□□ -0.87
APP-213ENST00000464867 HIVEP1P15822 2718 aa9.64□□□□□ -0.87
APP-213ENST00000464867 SPENQ96T58 3664 aaKnown RBP9.63□□□□□ -0.87
APP-213ENST00000464867 MKRN2OSH3BPM6 223 aa9.63□□□□□ -0.87
APP-213ENST00000464867 M0QYT0 321 aa9.63□□□□□ -0.87
APP-213ENST00000464867 CASC3O15234 703 aaKnown RBP9.63□□□□□ -0.87
APP-213ENST00000464867 PRKAR1AP10644 381 aa9.63□□□□□ -0.87
APP-213ENST00000464867 ETV5P41161 510 aa9.63□□□□□ -0.87
APP-213ENST00000464867 RECQLP46063 649 aaPredicted RBP9.63□□□□□ -0.87
APP-213ENST00000464867 CASP5P51878 434 aa9.63□□□□□ -0.87
APP-213ENST00000464867 METAP1P53582 386 aa9.63□□□□□ -0.87
APP-213ENST00000464867 SLC8A3P57103 927 aa9.63□□□□□ -0.87
APP-213ENST00000464867 HMGN5P82970 282 aaKnown RBP9.63□□□□□ -0.87
APP-213ENST00000464867 SULT2A1Q06520 285 aa9.63□□□□□ -0.87
APP-213ENST00000464867 DPYDQ12882 1025 aa9.63□□□□□ -0.87
APP-213ENST00000464867 PDE1CQ14123 709 aaPredicted RBP9.63□□□□□ -0.87
APP-213ENST00000464867 ACCSLQ4AC99 568 aa9.63□□□□□ -0.87
APP-213ENST00000464867 PRRT3Q5FWE3 981 aa9.63□□□□□ -0.87
APP-213ENST00000464867 PHF19Q5T6S3 580 aa9.63□□□□□ -0.87
APP-213ENST00000464867 KYAT3Q6YP21 454 aaKnown RBP9.63□□□□□ -0.87
APP-213ENST00000464867 SKAP1Q86WV1 359 aa9.63□□□□□ -0.87
APP-213ENST00000464867 ARL10Q8N8L6 244 aa9.63□□□□□ -0.87
APP-213ENST00000464867 OR6C4Q8NGE1 309 aa9.63□□□□□ -0.87
APP-213ENST00000464867 CCDC74AQ96AQ1 378 aa9.63□□□□□ -0.87
APP-213ENST00000464867 LLPHQ9BRT6 129 aaKnown RBP9.63□□□□□ -0.87
APP-213ENST00000464867 EFHD1Q9BUP0 239 aa9.63□□□□□ -0.87
APP-213ENST00000464867 SLC13A1Q9BZW2 595 aa9.63□□□□□ -0.87
APP-213ENST00000464867 APOBEC3BQ9UH17 382 aaKnown RBP9.63□□□□□ -0.87
APP-213ENST00000464867 SFMBT1Q9UHJ3 866 aa9.63□□□□□ -0.87
APP-213ENST00000464867 FPGTO14772 594 aa9.62□□□□□ -0.87
APP-213ENST00000464867 ALOX15BO15296 676 aa9.62□□□□□ -0.87
APP-213ENST00000464867 YY2O15391 372 aa9.62□□□□□ -0.87
APP-213ENST00000464867 NKX2-8O15522 239 aa9.62□□□□□ -0.87
APP-213ENST00000464867 HNRNPRO43390 633 aaKnown RBP9.62□□□□□ -0.87
APP-213ENST00000464867 ALAS2P22557 587 aa9.62□□□□□ -0.87
APP-213ENST00000464867 THOP1P52888 689 aa9.62□□□□□ -0.87
APP-213ENST00000464867 AP3M2P53677 418 aa9.62□□□□□ -0.87
APP-213ENST00000464867 MC1RQ01726 317 aa9.62□□□□□ -0.87
APP-213ENST00000464867 CYP24A1Q07973 514 aa9.62□□□□□ -0.87
APP-213ENST00000464867 C1orf61Q13536 156 aa9.62□□□□□ -0.87
APP-213ENST00000464867 PTK2BQ14289 1009 aa9.62□□□□□ -0.87
APP-213ENST00000464867 SGSM1Q2NKQ1 1148 aa9.62□□□□□ -0.87
APP-213ENST00000464867 DEFB109BQ30KR1 87 aa9.62□□□□□ -0.87
APP-213ENST00000464867 TCTN3Q6NUS6 607 aa9.62□□□□□ -0.87
APP-213ENST00000464867 ASB18Q6ZVZ8 466 aa9.62□□□□□ -0.87
APP-213ENST00000464867 CACNA2D3Q8IZS8 1091 aa9.62□□□□□ -0.87
APP-213ENST00000464867 SLC45A3Q96JT2 553 aa9.62□□□□□ -0.87
APP-213ENST00000464867 LMLNQ96KR4 655 aa9.62□□□□□ -0.87
APP-213ENST00000464867 BMFQ96LC9 184 aa9.62□□□□□ -0.87
APP-213ENST00000464867 NT5C1AQ9BXI3 368 aa9.62□□□□□ -0.87
APP-213ENST00000464867 SDCBP2Q9H190 292 aa9.62□□□□□ -0.87
APP-213ENST00000464867 GPN2Q9H9Y4 310 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms