RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 TRPM6Q9BX84 2022 aa13.55□□□□□ -0.24
MRPL55-224ENST00000464148 LMO7DNF2Z398 122 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 PSMA7O14818 248 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 TSPAN6O43657 245 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 AP1G1O43747 822 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 GCATO75600 419 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 PTMSP20962 102 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 OR1E1P30953 314 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 USP8P40818 1118 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 PDX1P52945 283 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 INHBCP55103 352 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 SRSF1Q07955 248 aaKnown RBP eCLIP13.54□□□□□ -0.24
MRPL55-224ENST00000464148 FAXCQ5TGI0 409 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 RETSATQ6NUM9 610 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 LRRC31Q6UY01 552 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 PARS2Q7L3T8 475 aaKnown RBP13.54□□□□□ -0.24
MRPL55-224ENST00000464148 RAB11FIP2Q7L804 512 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 PHACTR4Q8IZ21 702 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 LIN37Q96GY3 246 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-224ENST00000464148 CPXM1Q96SM3 734 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 C1QTNF2Q9BXJ5 285 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 STRADBQ9C0K7 418 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 INTS2Q9H0H0 1204 aaKnown RBP13.54□□□□□ -0.24
MRPL55-224ENST00000464148 TKTL2Q9H0I9 626 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 TCEAL2Q9H3H9 227 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-224ENST00000464148 ZDHHC6Q9H6R6 413 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 WDCPQ9H6R7 721 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 STARD5Q9NSY2 213 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 GULP1Q9UBP9 304 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 DOLKQ9UPQ8 538 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 KIF26BQ2KJY2 2108 aa13.54□□□□□ -0.24
MRPL55-224ENST00000464148 TMX2-CTNND1H3BSU7 103 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 TERTO14746 1132 aaKnown RBP13.53□□□□□ -0.24
MRPL55-224ENST00000464148 YY2O15391 372 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 ITGB2P05107 769 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 FAM87AP0C7U9 286 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 SFTPCP11686 197 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 NOS2P35228 1153 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 UGT1A5P35504 534 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 CCNHP51946 323 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-224ENST00000464148 PFN3P60673 137 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 EIF3IQ13347 325 aaKnown RBP13.53□□□□□ -0.24
MRPL55-224ENST00000464148 TGIF1Q15583 401 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 CARD16Q5EG05 197 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 COLEC12Q5KU26 742 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 C11orf57Q6ZUT1 292 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-224ENST00000464148 FAM183BPQ6ZVS7 135 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 PASD1Q8IV76 773 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 RYBPQ8N488 228 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-224ENST00000464148 PCDH20Q8N6Y1 951 aaKnown RBP13.53□□□□□ -0.24
MRPL55-224ENST00000464148 DENND6BQ8NEG7 585 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 OR7D4Q8NG98 312 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 SMARCE1Q969G3 411 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 GFM1Q96RP9 751 aaKnown RBP13.53□□□□□ -0.24
MRPL55-224ENST00000464148 LRRC61Q9BV99 259 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 CEP44Q9C0F1 390 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 SYNCQ9H7C4 482 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 PIGVQ9NUD9 493 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 MPP6Q9NZW5 540 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 PCDHGA7Q9Y5G6 932 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 ATP6V1DQ9Y5K8 247 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 SNX10Q9Y5X0 201 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 PTPN13Q12923 2485 aa13.53□□□□□ -0.24
MRPL55-224ENST00000464148 FLNCQ14315 2725 aa13.52□□□□□ -0.24
MRPL55-224ENST00000464148 NTN3O00634 580 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-224ENST00000464148 NOBOXO60393 691 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 ZNF821O75541 412 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-224ENST00000464148 DAB1O75553 588 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 JMJD7P0C870 316 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 TSHRP16473 764 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 SERPINH1P50454 418 aaKnown RBP13.52□□□□□ -0.25
MRPL55-224ENST00000464148 SNX16P57768 344 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 SLC20A2Q08357 652 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 BRMS1LQ5PSV4 323 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 ZNF574Q6ZN55 896 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-224ENST00000464148 B3GNT8Q7Z7M8 397 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 VPS36Q86VN1 386 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 WDTC1Q8N5D0 677 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 ZSCAN1Q8NBB4 408 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 SCG3Q8WXD2 468 aaKnown RBP13.52□□□□□ -0.25
MRPL55-224ENST00000464148 ASB12Q8WXK4 309 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 RAB7BQ96AH8 199 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 DHTKD1Q96HY7 919 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-224ENST00000464148 ANP32EQ9BTT0 268 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 FOXP3Q9BZS1 431 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 ATP13A1Q9HD20 1204 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 ARHGEF38Q9NXL2 777 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 SEPT10Q9P0V9 454 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 SIRPGQ9P1W8 387 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 HECAQ9UBI9 543 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-224ENST00000464148 GGT7Q9UJ14 662 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 ITM2BQ9Y287 266 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 FCF1Q9Y324 198 aaKnown RBP13.52□□□□□ -0.25
MRPL55-224ENST00000464148 PAXBP1Q9Y5B6 917 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 RP1P56715 2156 aa13.52□□□□□ -0.25
MRPL55-224ENST00000464148 ILVBLA1L0T0 632 aa13.51□□□□□ -0.25
MRPL55-224ENST00000464148 DRGXA6NNA5 263 aa13.51□□□□□ -0.25
MRPL55-224ENST00000464148 C16orf96A6NNT2 1141 aa13.51□□□□□ -0.25
MRPL55-224ENST00000464148 GOLGA6L22H0YM25 854 aa13.51□□□□□ -0.25
MRPL55-224ENST00000464148 SUV39H1O43463 412 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms