RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 ZDHHC17Q8IUH5 632 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 CPLX3Q8WVH0 158 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 NAF1Q96HR8 494 aaKnown RBP23.66■■□□□ 1.38
SSNA1-203ENST00000463511 PPP1R16AQ96I34 528 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 TBCBQ99426 244 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 LGMNQ99538 433 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 HDAC8Q9BY41 377 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 NLGN3Q9NZ94 848 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 AIPL1Q9NZN9 384 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 WASF2Q9Y6W5 498 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 KIF26BQ2KJY2 2108 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 TEX51A0A1B0GUA7 166 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 DRGXA6NNA5 263 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 NEBLO76041 1014 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 MPOP05164 745 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 CHRNB2P17787 502 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 OR1E1P30953 314 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 NEK3P51956 506 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 MAPK8IP2Q13387 824 aaPredicted RBP23.65■■□□□ 1.38
SSNA1-203ENST00000463511 CDCP2Q5VXM1 449 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 Q6ZSR6 202 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 SLC20A1Q8WUM9 679 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 NT5C3BQ969T7 300 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 PGAP3Q96FM1 320 aaPredicted RBP23.65■■□□□ 1.38
SSNA1-203ENST00000463511 DEPDC7Q96QD5 511 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 PAXBP1Q9Y5B6 917 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 RP1P56715 2156 aa23.65■■□□□ 1.38
SSNA1-203ENST00000463511 IGLV3-10A0A075B6K4 115 aa23.64■■□□□ 1.37
SSNA1-203ENST00000463511 LY6G6EA0A0G2JKS1 128 aa23.64■■□□□ 1.37
SSNA1-203ENST00000463511 ZNF821O75541 412 aaPredicted RBP23.64■■□□□ 1.37
SSNA1-203ENST00000463511 MMEP08473 750 aa23.64■■□□□ 1.37
SSNA1-203ENST00000463511 GABREP78334 506 aa23.64■■□□□ 1.37
SSNA1-203ENST00000463511 ZBED6P86452 979 aa23.64■■□□□ 1.37
SSNA1-203ENST00000463511 FAM102AQ5T9C2 384 aaPredicted RBP23.64■■□□□ 1.37
SSNA1-203ENST00000463511 TAF3Q5VWG9 929 aa23.64■■□□□ 1.37
SSNA1-203ENST00000463511 E4F1Q66K89 784 aaPredicted RBP23.64■■□□□ 1.37
SSNA1-203ENST00000463511 ZNF677Q86XU0 584 aa23.64■■□□□ 1.37
SSNA1-203ENST00000463511 IFT43Q96FT9 208 aa23.64■■□□□ 1.37
SSNA1-203ENST00000463511 BMFQ96LC9 184 aa23.64■■□□□ 1.37
SSNA1-203ENST00000463511 SPON2Q9BUD6 331 aa23.64■■□□□ 1.37
SSNA1-203ENST00000463511 U3KQA8 63 aa23.64■■□□□ 1.37
SSNA1-203ENST00000463511 POM121BA6NF01 834 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 NEMP2A6NFY4 417 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 SRGAP2O75044 1071 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 USP12O75317 370 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 CSO75390 466 aaKnown RBP23.63■■□□□ 1.37
SSNA1-203ENST00000463511 F9P00740 461 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 ADRB3P13945 408 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 CASP14P31944 242 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 SERPINH1P50454 418 aaKnown RBP23.63■■□□□ 1.37
SSNA1-203ENST00000463511 PCBP4P57723 403 aaKnown RBP23.63■■□□□ 1.37
SSNA1-203ENST00000463511 HNRNPKP61978 463 aaKnown RBP eCLIP23.63■■□□□ 1.37
SSNA1-203ENST00000463511 CDR2Q01850 454 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 FGL2Q14314 439 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 SLC25A52Q3SY17 297 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 ARTNQ5T4W7 220 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 KIAA1161Q6NSJ0 714 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 TMEM35BQ8NCS4 154 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 ZNF248Q8NDW4 579 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 MRFAP1L1Q96HT8 127 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 C1orf74Q96LT6 269 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 SLC17A9Q9BYT1 436 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 OSBPL2Q9H1P3 480 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 PDCL3Q9H2J4 239 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 GPR27Q9NS67 375 aa23.63■■□□□ 1.37
SSNA1-203ENST00000463511 LUC7L2Q9Y383 392 aaKnown RBP23.63■■□□□ 1.37
SSNA1-203ENST00000463511 K7ESM1 405 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 SCAMP1O15126 338 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 RAD51BO15315 384 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 GP1BAP07359 652 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 CCDC172P0C7W6 258 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 ITGB7P26010 798 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 CDH5P33151 784 aaPredicted RBP23.62■■□□□ 1.37
SSNA1-203ENST00000463511 DNA2P51530 1060 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 RPS21P63220 83 aaKnown RBP23.62■■□□□ 1.37
SSNA1-203ENST00000463511 FMO1Q01740 532 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 TBX2Q13207 712 aaPredicted RBP23.62■■□□□ 1.37
SSNA1-203ENST00000463511 FZD2Q14332 565 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 ASIC2Q16515 512 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 RETSATQ6NUM9 610 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 KYAT3Q6YP21 454 aaKnown RBP23.62■■□□□ 1.37
SSNA1-203ENST00000463511 FAM181AQ8N9Y4 354 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 LSM14AQ8ND56 463 aaKnown RBP23.62■■□□□ 1.37
SSNA1-203ENST00000463511 ZNF548Q8NEK5 533 aaPredicted RBP23.62■■□□□ 1.37
SSNA1-203ENST00000463511 FAM174AQ8TBP5 190 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 ZNF578Q96N58 590 aaPredicted RBP23.62■■□□□ 1.37
SSNA1-203ENST00000463511 DUSP23Q9BVJ7 150 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 ABCG4Q9H172 646 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 ATP13A1Q9HD20 1204 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 ZNF212Q9UDV6 495 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 FADS3Q9Y5Q0 445 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 HS3ST3A1Q9Y663 406 aa23.62■■□□□ 1.37
SSNA1-203ENST00000463511 ZNF462Q96JM2 2506 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 ILVBLA1L0T0 632 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 ZMPSTE24O75844 475 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 PAK4O96013 591 aaPredicted RBP23.61■■□□□ 1.37
SSNA1-203ENST00000463511 L1CAMP32004 1257 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 FLT3P36888 993 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 PRKCIP41743 596 aa23.61■■□□□ 1.37
SSNA1-203ENST00000463511 CCNHP51946 323 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms