RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ST8SIA6P61647 398 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 GCNT1Q02742 428 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 RING1Q06587 406 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 CETN1Q12798 172 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 PAK1Q13153 545 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 CDH18Q13634 790 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 BECN1Q14457 450 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 KCNJ12Q14500 433 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 POM121L1PQ3SYA9 428 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 PITRM1Q5JRX3 1037 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 MPP7Q5T2T1 576 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 C9orf64Q5T6V5 341 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 NUGGCQ68CJ6 796 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 ANKRD34AQ69YU3 496 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 CDPF1Q6NVV7 123 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 NCEH1Q6PIU2 408 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 CCNI2Q6ZMN8 369 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 DBX2Q6ZNG2 339 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 TMEM110Q86TL2 294 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 TAC4Q86UU9 113 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 GATAD2AQ86YP4 633 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 PASD1Q8IV76 773 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 TRIM59Q8IWR1 403 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 DEFB106AQ8N104 65 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 CELF2-AS1Q8N7Q2 184 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 RNF214Q8ND24 703 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 OR52K2Q8NGK3 314 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 MDM1Q8TC05 714 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 WFIKKN2Q8TEU8 576 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 WFDC12Q8WWY7 111 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 ADAMTS14Q8WXS8 1223 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 IRGQQ8WZA9 623 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 GOLGA1Q92805 767 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 PTPRN2Q92932 1015 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 AZIN2Q96A70 460 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 TTC17Q96AE7 1141 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 SLC39A13Q96H72 371 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 MRGPRX3Q96LB0 322 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 SLC6A18Q96N87 628 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 UBL7Q96S82 380 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 OMDQ99983 421 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 TRIM55Q9BYV6 548 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 ZDHHC5Q9C0B5 715 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 RSPH9Q9H1X1 276 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 PIF1Q9H611 641 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 CAAP1Q9H8G2 361 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 TM9SF3Q9HD45 589 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 PLCB1Q9NQ66 1216 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 ACTR10Q9NZ32 417 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 ERVW-1Q9UQF0 538 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 CEP83Q9Y592 693 aa4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.84□□□□□ -1.63
GTF3C3-208ENST00000455546 IGF2RP11717 2491 aa4.84□□□□□ -1.64
GTF3C3-208ENST00000455546 CFAP47Q6ZTR5 3102 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 APC2O95996 2303 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 RP1P56715 2156 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TBC1D3DA0A087WVF3 549 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TBC1D3IA0A087WXS9 549 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TBC1D3EA0A087X179 549 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TBC1D3KA0A087X1G2 549 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 A0A1W2PPC4 97 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 BICDL2A1A5D9 508 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TBC1D3FA6NER0 549 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 SLC22A31A6NKX4 558 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TBC1D3LB9A6J9 549 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 C9orf172C9J069 976 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 RNF103O00237 685 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 CBX4O00257 560 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 FOXN3O00409 490 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 FANCGO15287 622 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 P4HA2O15460 535 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 IRAK2O43187 625 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 RNASEH2AO75792 299 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TRIM16O95361 564 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 CER1O95813 267 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 IL1BP01584 269 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 TBC1D3HP0C7X1 549 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 PNMA6AP0CW24 399 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 IMPDH2P12268 514 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 PDGFRAP16234 1089 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 CD27P26842 260 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 PON1P27169 355 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 MAT2AP31153 395 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 CHRNA4P43681 627 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 ACADSBP45954 432 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 PSMD8P48556 350 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 AFF3P51826 1226 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 ZNF445P59923 1031 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 RNASE9P60153 205 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 YWHAZP63104 245 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 ECT2LQ008S8 904 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 BNIP3Q12983 259 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 NME3Q13232 169 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 HNRNPDQ14103 355 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 E2F5Q15329 346 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 STILQ15468 1287 aa4.83□□□□□ -1.64
GTF3C3-208ENST00000455546 CST6Q15828 149 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms