RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 UNC13CQ8NB66 2214 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 UTP20O75691 2785 aaKnown RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 USP9YO00507 2555 aaPredicted RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SPTY2D1-AS1A0A0U1RR47 76 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GOLGA6L4A6NEF3 574 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KRIT1O00522 736 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NEMP1O14524 444 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 AQP9O43315 295 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 MED7O43513 233 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 MAGEC1O60732 1142 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GADD45BO75293 160 aaPredicted RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZMPSTE24O75844 475 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DXOO77932 396 aaKnown RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TNFSF15O95150 251 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CD160O95971 181 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CSF2P04141 144 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PRNPP04156 253 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC2A3P11169 496 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CDK4P11802 303 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 C6P13671 934 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 WT1P19544 449 aaPredicted RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ITIH1P19827 911 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ITGB7P26010 798 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 OR1E1P30953 314 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RECQLP46063 649 aaPredicted RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CDH4P55283 916 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 HNRNPKP61978 463 aaKnown RBP eCLIP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CYP4F2P78329 520 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SKOR1P84550 965 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ATP11AP98196 1134 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 E2F1Q01094 437 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RHDQ02161 417 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CETN1Q12798 172 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC12A1Q13621 1099 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 IRF4Q15306 451 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NR0B2Q15466 257 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CDO1Q16878 200 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 COLEC12Q5KU26 742 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DPY19L2P1Q6NXN4 242 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZCCHC8Q6NZY4 707 aaKnown RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 C11orf57Q6ZUT1 292 aaPredicted RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 BEND5Q7L4P6 421 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC26A9Q7LBE3 791 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PHACTR4Q8IZ21 702 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SDR16C5Q8N3Y7 309 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 STK32AQ8WU08 396 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 JPH3Q8WXH2 748 aaPredicted RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SHC3Q92529 594 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 EXTL1Q92935 676 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CCDC74AQ96AQ1 378 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RNF31Q96EP0 1072 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PDXPQ96GD0 296 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DHTKD1Q96HY7 919 aaPredicted RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CFAP57Q96MR6 1250 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NPY6RQ99463 290 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CCDC3Q9BQI4 270 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SRRTQ9BXP5 876 aaKnown RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 HDAC8Q9BY41 377 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC17A9Q9BYT1 436 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 IRX2Q9BZI1 471 aaPredicted RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CLPBQ9H078 707 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CLMPQ9H6B4 373 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SUDS3Q9H7L9 328 aaPredicted RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SIX2Q9NPC8 291 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 MBNL1Q9NR56 388 aaKnown RBP6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 APEX2Q9UBZ4 518 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PISDQ9UG56 409 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC12A6Q9UHW9 1150 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NEU3Q9UQ49 428 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SDK2Q58EX2 2172 aa6.1□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TEX15Q9BXT5 2789 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 C16orf96A6NNT2 1141 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CDRT15L2A8MXV6 281 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 B8ZZF3 427 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 D6RAR5 112 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FAM72CH0Y354 149 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 H3BM21 787 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 K7ENP7 123 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PMM2O15305 246 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 P4HA2O15460 535 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ARHGAP6O43182 974 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 MMP20O60882 483 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PIGNO95427 931 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PCCBP05166 539 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RPLP0P05388 317 aaKnown RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GP1BAP07359 652 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TSHRP16473 764 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RBMS1P29558 406 aaKnown RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NUDT1P36639 197 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RABIFP47224 123 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CXCR3P49682 368 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 THOP1P52888 689 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ADKP55263 362 aaKnown RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ERVPABLB-1P60509 514 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RPS21P63220 83 aaKnown RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KRT83P78385 493 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC6A3Q01959 620 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GNA12Q03113 381 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DEUP1Q05D60 604 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RAPGEF1Q13905 1077 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms