RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 PARVAQ9NVD7 372 aa18.77■□□□□ 0.6
PDLIM2-214ENST00000452226 IL36AQ9UHA7 158 aa18.77■□□□□ 0.6
PDLIM2-214ENST00000452226 RAXQ9Y2V3 346 aa18.77■□□□□ 0.6
PDLIM2-214ENST00000452226 RNF103O00237 685 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 CCP110O43303 1012 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 RFPL3O75679 317 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 ZMPSTE24O75844 475 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 PLEKP08567 350 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 C1SP09871 688 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 OGDHQ02218 1023 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 GNA12Q03113 381 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 SLC20A2Q08357 652 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 CYP4F3Q08477 520 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 COL28A1Q2UY09 1125 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 ZNF284Q2VY69 593 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 ARL13BQ3SXY8 428 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 TDRD12Q587J7 1177 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 MANEALQ5VSG8 457 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 DCUN1D2Q6PH85 259 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 SARM1Q6SZW1 724 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 DPY19L3Q6ZPD9 716 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 ERN2Q76MJ5 926 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 KANSL1Q7Z3B3 1105 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 HORMAD1Q86X24 394 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 PDCD7Q8N8D1 485 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 TMEM145Q8NBT3 493 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 MYOCQ99972 504 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 HDAC8Q9BY41 377 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 ATP13A1Q9HD20 1204 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 SCUBE2Q9NQ36 999 aa18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 PPARGC1AQ9UBK2 798 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-214ENST00000452226 FASNP49327 2511 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 ANKRD62A6NC57 917 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 EIF4E1BA6NMX2 242 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 ZNF821O75541 412 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 LEFTY1O75610 366 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 PCDH8O95206 1070 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 CDK4P11802 303 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 ACADVLP49748 655 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 SERPINH1P50454 418 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 DNA2P51530 1060 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 TRIM14Q14142 442 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 CCDC185Q8N715 623 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 TSC1Q92574 1164 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 PPP1R16AQ96I34 528 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 DNAJC7Q99615 494 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 CEP44Q9C0F1 390 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 FZD3Q9NPG1 666 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 OR12D3Q9UGF7 316 aa18.75■□□□□ 0.59
PDLIM2-214ENST00000452226 ASXL3Q9C0F0 2248 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 A0A087X0T9 212 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 TMEM191CA6NGB0 347 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 ATMINO43313 823 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 SDC3O75056 442 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 FAM228BP0C875 321 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 THEGLP0DJG4 465 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 MYBL1P10243 752 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 JUPP14923 745 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 AKT2P31751 481 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 CLDN6P56747 220 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 ARF5P84085 180 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 RWDD4Q6NW29 188 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 VPS36Q86VN1 386 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 PCDH20Q8N6Y1 951 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 OR8K1Q8NGG5 319 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 FNIP1Q8TF40 1166 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 HNRNPLLQ8WVV9 542 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 TRIM11Q96F44 468 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 MAGEB5Q9BZ81 275 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 RETREG1Q9H6L5 497 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 CNOT8Q9UFF9 292 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 NENFQ9UMX5 172 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 ZFR2Q9UPR6 939 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 WASF2Q9Y6W5 498 aa18.74■□□□□ 0.59
PDLIM2-214ENST00000452226 HNRNPA2B1P22626 353 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 HNF1BP35680 557 aa18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 ACVRL1P37023 503 aa18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 NEK3P51956 506 aa18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 CARD16Q5EG05 197 aa18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 SEL1L3Q68CR1 1132 aa18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 TMC6Q7Z403 805 aa18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 ZNF653Q96CK0 615 aa18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 HEPHQ9BQS7 1158 aa18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 NEU3Q9UQ49 428 aa18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 FCF1Q9Y324 198 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 ACTL7AQ9Y615 435 aa18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 IGSF10Q6WRI0 2623 aa18.73■□□□□ 0.59
PDLIM2-214ENST00000452226 FAM72CH0Y354 149 aa18.72■□□□□ 0.59
PDLIM2-214ENST00000452226 CKMT2P17540 419 aa18.72■□□□□ 0.59
PDLIM2-214ENST00000452226 ITGB7P26010 798 aa18.72■□□□□ 0.59
PDLIM2-214ENST00000452226 ETFBP38117 255 aa18.72■□□□□ 0.59
PDLIM2-214ENST00000452226 CCNHP51946 323 aaPredicted RBP18.72■□□□□ 0.59
PDLIM2-214ENST00000452226 AIF1P55008 147 aa18.72■□□□□ 0.59
PDLIM2-214ENST00000452226 CLDN2P57739 230 aa18.72■□□□□ 0.59
PDLIM2-214ENST00000452226 TMEM259Q4ZIN3 620 aa18.72■□□□□ 0.59
PDLIM2-214ENST00000452226 FAM72AQ5TYM5 149 aa18.72■□□□□ 0.59
PDLIM2-214ENST00000452226 FAM72DQ6L9T8 149 aa18.72■□□□□ 0.59
PDLIM2-214ENST00000452226 SLFN11Q7Z7L1 901 aa18.72■□□□□ 0.59
PDLIM2-214ENST00000452226 FAM72BQ86X60 149 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms