RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 HSPA4LO95757 839 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 GNAO1P09471 354 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 FGFR3P22607 806 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 ARRB2P32121 409 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 GPD2P43304 727 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 OAZ1P54368 228 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 PHC1P78364 1004 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 ZNF252P-AS1Q0IIN9 211 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 PGS1Q32NB8 556 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 CCDC58Q4VC31 144 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 SLC9A4Q6AI14 798 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 SLC39A4Q6P5W5 647 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 FAF2Q96CS3 445 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 OR52B2Q96RD2 323 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 ACO2Q99798 780 aaKnown RBP19.42■□□□□ 0.7
HMGA1-205ENST00000447654 UPF3AQ9H1J1 476 aaKnown RBP19.42■□□□□ 0.7
HMGA1-205ENST00000447654 ANKEF1Q9NU02 776 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 TCEAL9Q9UHQ7 104 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 DSEQ9UL01 958 aa19.42■□□□□ 0.7
HMGA1-205ENST00000447654 A0A1W2PQ67 120 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 HEATR9A2RTY3 570 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 SLCO1B7G3V0H7 640 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 HOXD10P28358 340 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 RAD23AP54725 363 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 VGLL4Q14135 290 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 NEDD8Q15843 81 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 BROXQ5VW32 411 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 UNC5AQ6ZN44 842 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 GET4Q7L5D6 327 aaPredicted RBP19.41■□□□□ 0.7
HMGA1-205ENST00000447654 SFRP1Q8N474 314 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 CXorf38Q8TB03 319 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 ZSCAN18Q8TBC5 510 aaPredicted RBP19.41■□□□□ 0.7
HMGA1-205ENST00000447654 SNX19Q92543 992 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 RMDN1Q96DB5 314 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 CEP170P1Q96L14 293 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 CLSTN3Q9BQT9 956 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 TBX20Q9UMR3 447 aa19.41■□□□□ 0.7
HMGA1-205ENST00000447654 EIF3LQ9Y262 564 aaKnown RBP19.41■□□□□ 0.7
HMGA1-205ENST00000447654 TRIM24O15164 1050 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 MMP8P22894 467 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 RPL10P27635 214 aaKnown RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 CAPGP40121 348 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 P2RX3P56373 397 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 PSME3P61289 254 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 ILF2Q12905 390 aaKnown RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 MTM1Q13496 603 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 PUS10Q3MIT2 529 aaKnown RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 C2CD6Q53TS8 623 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 TMC5Q6UXY8 1006 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 MFSD14AQ96MC6 490 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 TRIT1Q9H3H1 467 aaKnown RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 ACAD9Q9H845 621 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 C20orf96Q9NUD7 363 aaPredicted RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 VTI1BQ9UEU0 232 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 WDR90Q96KV7 1748 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 SLC15A5A6NIM6 579 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 HDAC3O15379 428 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 ICMTO60725 284 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 DDNO94850 711 aaPredicted RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 FYNP06241 537 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 CKMT2P17540 419 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 IFNA8P32881 189 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 GRIK1P39086 918 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 PRKAA2P54646 552 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 RPL7AP62424 266 aaKnown RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 IFITM3Q01628 133 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 ROR1Q01973 937 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 SLC12A1Q13621 1099 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 XRRA1Q6P2D8 792 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 GPC2Q8N158 579 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 ZCCHC7Q8N3Z6 543 aaKnown RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 MFSD4AQ8N468 514 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 RNF148Q8N7C7 305 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 ZNF781Q8N8C0 355 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 ASCC1Q8N9N2 400 aaKnown RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 SIMC1Q8NDZ2 872 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 DEPDC1BQ8WUY9 529 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 PPWD1Q96BP3 646 aaKnown RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 ERLEC1Q96DZ1 483 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 JPH1Q9HDC5 661 aaPredicted RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 PDLIM7Q9NR12 457 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 TOPORSQ9NS56 1045 aaPredicted RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 FBXO9Q9UK97 447 aaPredicted RBP19.4■□□□□ 0.7
HMGA1-205ENST00000447654 SLC27A5Q9Y2P5 690 aa19.4■□□□□ 0.7
HMGA1-205ENST00000447654 MN1Q10571 1320 aaPredicted RBP19.39■□□□□ 0.7
HMGA1-205ENST00000447654 CNTNAP2Q9UHC6 1331 aa19.39■□□□□ 0.7
HMGA1-205ENST00000447654 TCRBV5S1A1TA0A578 114 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 SAC3D1A6NKF1 404 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 KPNA7A9QM74 516 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 ITIH1P19827 911 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 NAMPTP43490 491 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 ACTR2P61160 394 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 ECT2LQ008S8 904 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 CBX2Q14781 532 aaPredicted RBP19.39■□□□□ 0.69
HMGA1-205ENST00000447654 NOL9Q5SY16 702 aaKnown RBP19.39■□□□□ 0.69
HMGA1-205ENST00000447654 TWF2Q6IBS0 349 aaKnown RBP19.39■□□□□ 0.69
HMGA1-205ENST00000447654 USP51Q70EK9 711 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 BTLAQ7Z6A9 289 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 TDRD5Q8NAT2 981 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms