RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 TPTEP56180 551 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 CLPPQ16740 277 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 PPP1R3AQ16821 1122 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 LIPMQ5VYY2 423 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 ABRAXAS1Q6UWZ7 409 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 UTS2BQ765I0 119 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 CLEC14AQ86T13 490 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SPPL2CQ8IUH8 684 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 ABHD11Q8NFV4 315 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 OR13F1Q8NGS4 319 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 ZC3H15Q8WU90 426 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SGCDQ92629 289 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 ATP6V0A1Q93050 837 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 RMDN3Q96TC7 470 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 CPNE1Q99829 537 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 OMDQ99983 421 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SPAG4Q9NPE6 437 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 POLE4Q9NR33 117 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 IFT80Q9P2H3 777 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 CD300AQ9UGN4 299 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SLC39A10Q9ULF5 831 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 B3GNT3Q9Y2A9 372 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 TRAF6Q9Y4K3 522 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 IQCA1LA6NCM1 817 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 SDHDO14521 159 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 EI24O14681 340 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 MED7O43513 233 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 MYO1DO94832 1006 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 YBX3P16989 372 aaKnown RBP eCLIP11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 LIMK2P53671 638 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 TIGD2Q4W5G0 525 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 VASH1Q7L8A9 365 aaPredicted RBP11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 BRSK2Q8IWQ3 736 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 OR2T34Q8NGX1 318 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 OR2T3Q8NH03 318 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 LRCH3Q96II8 777 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 ANKRD36BP1Q96IX9 119 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 CGREF1Q99674 301 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 XYLT2Q9H1B5 865 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 SMARCAD1Q9H4L7 1026 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 VTA1Q9NP79 307 aa11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 UTP6Q9NYH9 597 aaKnown RBP11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 DNMT3BQ9UBC3 853 aaKnown RBP11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 TMA7Q9Y2S6 64 aaKnown RBP11.21□□□□□ -0.61
SEMA4D-209ENST00000429836 DOCK5Q9H7D0 1870 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 PSMD11O00231 422 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 MRASO14807 208 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 MT-ND1P03886 318 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 ICAM1P05362 532 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 POLBP06746 335 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 PSMB4P28070 264 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 EEF1DP29692 281 aaKnown RBP11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 ADSLP30566 484 aaPredicted RBP11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 SELENBP1Q13228 472 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 DGKZQ13574 1117 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 FASTKQ14296 549 aaKnown RBP11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 SPCS2Q15005 226 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 DUOXA2Q1HG44 320 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 INAVAQ3KP66 663 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 WDR49Q8IV35 697 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 CMTR2Q8IYT2 770 aaKnown RBP11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 TERB1Q8NA31 727 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 SHCBP1Q8NEM2 672 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 KCTD4Q8WVF5 259 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 SH3YL1Q96HL8 342 aaPredicted RBP11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 TRIM8Q9BZR9 551 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 ELOVL4Q9GZR5 314 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 UPF3AQ9H1J1 476 aaKnown RBP11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 VRTNQ9H8Y1 702 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 GTSE1Q9NYZ3 720 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 KLQ9UEF7 1012 aa11.21□□□□□ -0.62
SEMA4D-209ENST00000429836 WDR81Q562E7 1941 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 CCDC162PA2VCL2 907 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 GMNNO75496 209 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 SNAP29O95721 258 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 HNRNPLP14866 589 aaKnown RBP eCLIP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 CYP3A5P20815 502 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 OXTRP30559 389 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 HOXD11P31277 338 aaPredicted RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 GPD2P43304 727 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 TRAP1Q12931 704 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 INAQ16352 499 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 SMUG1Q53HV7 270 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 ZYG11AQ6WRX3 759 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 RPS27LQ71UM5 84 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 CDR2LQ86X02 465 aaPredicted RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 TMEM151AQ8N4L1 468 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 KDM1BQ8NB78 822 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 OR52K1Q8NGK4 314 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 MAGEE2Q8TD90 523 aaPredicted RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 USP33Q8TEY7 942 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 PTCD2Q8WV60 388 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 TOP1MTQ969P6 601 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 CPB2Q96IY4 423 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 TSPAN18Q96SJ8 248 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 LHPPQ9H008 270 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 RAD21L1Q9H4I0 556 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 ERVK-11Q9UQG0 969 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 TCP10L2B9ZVM9 353 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 H0YCG3 227 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms