RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 RBM7Q9Y580 266 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 TLE2Q04725 743 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 TAF10Q12962 218 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 MTAPQ13126 283 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 TSHZ1Q6ZSZ6 1077 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 IFNL1Q8IU54 200 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 LRRC49Q8IUZ0 686 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 NKAPQ8N5F7 415 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ZSCAN1Q8NBB4 408 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ZNF563Q8TA94 476 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 UPF1Q92900 1129 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 TIFAQ96CG3 184 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 MTERF3Q96E29 417 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 VCPIP1Q96JH7 1222 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 CPNE1Q99829 537 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ROGDIQ9GZN7 287 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ENOPH1Q9UHY7 261 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 DUSP12Q9UNI6 340 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 MAPRE3Q9UPY8 281 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 KIF13AQ9H1H9 1805 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 CNTNAP1P78357 1384 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 AP5Z1O43299 807 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 WBP4O75554 376 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 EPN2O95208 641 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 C8AP07357 584 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 IRGCQ6NXR0 463 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 FAM171BQ6P995 826 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 VITQ6UXI7 678 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 RAVER1Q8IY67 606 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ZSWIM2Q8NEG5 633 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 OR52L1Q8NGH7 329 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 OR2W6PQ8NHA6 318 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ZNF354BQ96LW1 612 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 COPS8Q99627 209 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 PACSIN1Q9BY11 444 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 RACGAP1Q9H0H5 632 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 CYLDQ9NQC7 956 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 UBAP1Q9NZ09 502 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 CPED1A4D0V7 1026 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ANKRD63C9JTQ0 380 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 BUD23O43709 281 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 SNUPNO95149 360 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 FAM228BP0C875 321 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 CPA2P48052 419 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 PTENP60484 403 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 BMPR2Q13873 1038 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 SLC29A2Q14542 456 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 STXBP5Q5T5C0 1151 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 FAM220AQ7Z4H9 259 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 FAM35AQ86V20 835 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 FAM126BQ8IXS8 530 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 OR6K2Q8NGY2 324 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 HCAR2Q8TDS4 363 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 MYO19Q96H55 970 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ACO2Q99798 780 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 LMAN2LQ9H0V9 348 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ANKRD6Q9Y2G4 727 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 SMIM31A0A1B0GVY4 71 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 MIPP30301 263 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 CORO1AP31146 461 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 CAP1Q01518 475 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 CAPSQ13938 189 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 XKR6Q5GH73 641 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ZDHHC20Q5W0Z9 365 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 VSTM1Q6UX27 236 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 DNAJC14Q6Y2X3 702 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ANKRD52Q8NB46 1076 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 NEK7Q8TDX7 302 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 GPR88Q9GZN0 384 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 MYLK2Q9H1R3 596 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 NXF3Q9H4D5 531 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 FANCFQ9NPI8 374 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 ADAM30Q9UKF2 790 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 SLC12A4Q9UP95 1085 aa10.04□□□□□ -0.8
CLTCL1-202ENST00000427926 A0A087X0B3 334 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 MGRN1O60291 552 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 CLDN11O75508 207 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 TM4SF1P30408 202 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 SOX6P35712 828 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 CRATP43155 626 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 DGKGP49619 791 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 NEK5Q6P3R8 708 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 REXO1L1PQ8IX06 675 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 AGGF1Q8N302 714 aaeCLIP10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 SCLYQ96I15 445 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 C5orf34Q96MH7 638 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 SPATA5L1Q9BVQ7 753 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 ISCUQ9H1K1 167 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 TMPRSS4Q9NRS4 437 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 TUBA8Q9NY65 449 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 MAT2BQ9NZL9 334 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 PRKAB1Q9Y478 270 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 PCDHGB3Q9Y5G1 929 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 CLUHO75153 1309 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 USP2O75604 605 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 GYPCP04921 128 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 FSHRP23945 695 aa10.03□□□□□ -0.8
CLTCL1-202ENST00000427926 RPL3P39023 403 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms