RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PRMT5O14744 637 aaPredicted RBP14.58□□□□□ -0.08
PTPN13-203ENST00000427191 KMOO15229 486 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 ATF6P18850 670 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 PSEN1P49768 467 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 HIPK1Q86Z02 1210 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 ANKRD13AQ8IZ07 590 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 RASSF5Q8WWW0 418 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 DMGDHQ9UI17 866 aaKnown RBP14.58□□□□□ -0.08
PTPN13-203ENST00000427191 ERBB2P04626 1255 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 PRKAR2AP13861 404 aaKnown RBP14.58□□□□□ -0.08
PTPN13-203ENST00000427191 RGS1Q08116 209 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 BOP1Q14137 746 aaKnown RBP14.58□□□□□ -0.08
PTPN13-203ENST00000427191 PARP6Q2NL67 630 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 C4orf19Q8IY42 314 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 PPP1R14BQ96C90 147 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 CAPN6Q9Y6Q1 641 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 CLTCL1P53675 1640 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 TRIM38O00635 465 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 FTH1P02794 183 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 TCHHQ07283 1943 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 ZNF720Q7Z2F6 126 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 AGBL3Q8NEM8 1001 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 REXO5Q96IC2 774 aaKnown RBP14.58□□□□□ -0.08
PTPN13-203ENST00000427191 TTLL2Q9BWV7 592 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 C2CD2Q9Y426 696 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 UMODL1Q5DID0 1318 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 PLEKP08567 350 aaPredicted RBP14.58□□□□□ -0.08
PTPN13-203ENST00000427191 CDK9P50750 372 aaKnown RBP14.58□□□□□ -0.08
PTPN13-203ENST00000427191 PCID2Q5JVF3 399 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 DNAJB7Q7Z6W7 309 aaPredicted RBP14.58□□□□□ -0.08
PTPN13-203ENST00000427191 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.58□□□□□ -0.08
PTPN13-203ENST00000427191 LEMD2Q8NC56 503 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 ABCC3O15438 1527 aa14.58□□□□□ -0.08
PTPN13-203ENST00000427191 FAM86C2PA6NEL3 165 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 LOC110117498-PIK3R3F6TDL0 507 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 AVILO75366 819 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 TGDSO95455 350 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 OTCP00480 354 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 TFRCP02786 760 aaKnown RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 NPTX2P47972 431 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 MRPS22P82650 360 aaKnown RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 TRMOQ9BU70 441 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 C2orf49Q9BVC5 232 aaPredicted RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 CDHR5Q9HBB8 845 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 IFNA6P05013 189 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 POLD2P49005 469 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 ALDH5A1P51649 535 aaPredicted RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 TAF5Q15542 800 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 PTPRNQ16849 979 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 RERGQ96A58 199 aaPredicted RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 TCF12Q99081 682 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 STOX2Q9P2F5 926 aaPredicted RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 TMA7Q9Y2S6 64 aaKnown RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 GPC6Q9Y625 555 aaPredicted RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 STYK1Q6J9G0 422 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 AFTPHQ6ULP2 937 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 TBC1D21Q8IYX1 336 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 TBC1D16Q8TBP0 767 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 ABCB10Q9NRK6 738 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 SPG21Q9NZD8 308 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 PPP2R3BQ9Y5P8 575 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 PLOD3O60568 738 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 PARNO95453 639 aaKnown RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 TSPAN18Q96SJ8 248 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 SENP6Q9GZR1 1112 aaPredicted RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 R3HDM2Q9Y2K5 976 aaKnown RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 LRRIQ1Q96JM4 1722 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 SIN3BO75182 1162 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 KRT33AO76009 404 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 ATP5F1P24539 256 aaPredicted RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 ZFP69Q49AA0 526 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 PLET1Q6UQ28 207 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 SELENOMQ8WWX9 145 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 CRISPLD1Q9H336 500 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 ATXN10Q9UBB4 475 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 SCAF8Q9UPN6 1271 aaKnown RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 FGFR1P11362 822 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 PECAM1P16284 738 aaPredicted RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 MTM1Q13496 603 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 CYP2R1Q6VVX0 501 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 ZNF554Q86TJ5 538 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 FUKQ8N0W3 1084 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 HM13Q8TCT9 377 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 FNDC11Q9BVV2 318 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 KIAA1210Q9ULL0 1709 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 TUFMP49411 452 aaKnown RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 AKIRIN2Q53H80 203 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 PRCCQ92733 491 aaPredicted RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 KLHL32Q96NJ5 620 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 MARK1Q9P0L2 795 aa14.57□□□□□ -0.08
PTPN13-203ENST00000427191 TDRKHQ9Y2W6 561 aaKnown RBP14.57□□□□□ -0.08
PTPN13-203ENST00000427191 ZSCAN5CA6NGD5 496 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 GRIA3P42263 894 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ATP6V0D1P61421 351 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ABATP80404 500 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 PABPC1LQ4VXU2 614 aaKnown RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 CDKAL1Q5VV42 579 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 KBTBD7Q8WVZ9 684 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 PIK3R3Q92569 461 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms