RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 AJUBAQ96IF1 538 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 ZNF512Q96ME7 567 aaPredicted RBP4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 YTHDC1Q96MU7 727 aaKnown RBP4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 ZMAT2Q96NC0 199 aaKnown RBP4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 ADPGKQ9BRR6 497 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 POLR3CQ9BUI4 534 aaPredicted RBP4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 TRIM54Q9BYV2 358 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 DPH1Q9BZG8 443 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 TM6SF1Q9BZW5 370 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 MRPL46Q9H2W6 279 aaKnown RBP4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 TTC12Q9H892 705 aaPredicted RBP4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 CYP4F11Q9HBI6 524 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 TUFT1Q9NNX1 390 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 ARFGAP3Q9NP61 516 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 GJB4Q9NTQ9 266 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 ING3Q9NXR8 418 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 TNFSF13BQ9Y275 285 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 GDAQ9Y2T3 454 aa4.98□□□□□ -1.61
CDC42EP3-202ENST00000422687 A0A087WWV3 80 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 A0A1W2PPC4 97 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 TMEM8BA6NDV4 472 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 SLC38A8A6NNN8 435 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 F8W8V4 182 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 M0QZQ0 153 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 F2RL2O00254 374 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 PODXLO00592 558 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 CPLX1O14810 134 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 EXTL3O43909 919 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 MED24O75448 989 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 RPP40O75818 363 aaKnown RBP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 IL18RAPO95256 599 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 CTDNEP1O95476 244 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 ZSCAN22P10073 491 aaPredicted RBP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 KITP10721 976 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 GYPEP15421 78 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 GJA1P17302 382 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 FPR1P21462 350 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 MUTP22033 750 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 PROZP22891 400 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 RPL13P26373 211 aaKnown RBP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 RPA1P27694 616 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 SLC7A1P30825 629 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 STT3AP46977 705 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 AARSP49588 968 aaKnown RBP eCLIP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 PER3P56645 1201 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 ADAM8P78325 824 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 TWF1Q12792 350 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 SP140Q13342 867 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 ACAP1Q15027 740 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 PCOLCEQ15113 449 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 TEAD2Q15562 447 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 CALCRLQ16602 461 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 PLK5Q496M5 336 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 AASDHQ4L235 1098 aaPredicted RBP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 CTXN3Q4LDR2 81 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 FLYWCH1Q4VC44 716 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 TMEM196Q5HYL7 178 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 ATF7IP2Q5U623 682 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 KBTBD6Q86V97 674 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 ARID3BQ8IVW6 561 aaPredicted RBP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 TMEFF1Q8IYR6 380 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 ELMOD1Q8N336 334 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 SH2D3CQ8N5H7 860 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 BRIX1Q8TDN6 353 aaKnown RBP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 CSGALNACT1Q8TDX6 532 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 KBTBD7Q8WVZ9 684 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 SLC7A6OSQ96CW6 309 aaPredicted RBP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 CHFRQ96EP1 664 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 ENKD1Q9H0I2 346 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 CDT1Q9H211 546 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 VPS11Q9H270 941 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 ARRDC1-AS1Q9H2J1 176 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 LDAHQ9H6V9 325 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 PNPLA8Q9NP80 782 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 ASAH2Q9NR71 780 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 VPS45Q9NRW7 570 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 TMEM140Q9NV12 185 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 SLC38A7Q9NVC3 462 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 PIH1D1Q9NWS0 290 aaKnown RBP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 SIDT1Q9NXL6 827 aaKnown RBP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 HSFX1Q9UBD0 423 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 AJAP1Q9UKB5 411 aaPredicted RBP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 LRCH1Q9Y2L9 728 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 YIPF1Q9Y548 306 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 ASB3Q9Y575 518 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 SNX13Q9Y5W8 968 aa4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 MORC2Q9Y6X9 1032 aaPredicted RBP4.97□□□□□ -1.61
CDC42EP3-202ENST00000422687 CACNA1EQ15878 2313 aa4.96□□□□□ -1.61
CDC42EP3-202ENST00000422687 GREB1Q4ZG55 1949 aa4.96□□□□□ -1.62
CDC42EP3-202ENST00000422687 A0A087WV62 115 aa4.96□□□□□ -1.62
CDC42EP3-202ENST00000422687 BCLAF3A2AJT9 711 aaKnown RBP4.96□□□□□ -1.62
CDC42EP3-202ENST00000422687 POM121BA6NF01 834 aa4.96□□□□□ -1.62
CDC42EP3-202ENST00000422687 TRDMT1O14717 391 aaKnown RBP4.96□□□□□ -1.62
CDC42EP3-202ENST00000422687 NEMFO60524 1076 aa4.96□□□□□ -1.62
CDC42EP3-202ENST00000422687 PFKFB2O60825 505 aa4.96□□□□□ -1.62
CDC42EP3-202ENST00000422687 CDKL5O76039 1030 aa4.96□□□□□ -1.62
CDC42EP3-202ENST00000422687 PRAMEF12O95522 483 aa4.96□□□□□ -1.62
CDC42EP3-202ENST00000422687 FGF19O95750 216 aa4.96□□□□□ -1.62
CDC42EP3-202ENST00000422687 VSIG10L2P0DP72 767 aa4.96□□□□□ -1.62
CDC42EP3-202ENST00000422687 MCF2P10911 925 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms