RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 BTBD7Q9P203 1132 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 TMCO1Q9UM00 188 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 GJB6O95452 261 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 CNGA2Q16280 664 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 STAG3L4Q8TBR4 150 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 CENPIQ92674 756 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 NOD2Q9HC29 1040 aa11.33□□□□□ -0.6
PTCH1-205ENST00000418258 PAIP2BQ9ULR5 123 aaKnown RBP11.33□□□□□ -0.6
PTCH1-205ENST00000418258 LDLRP01130 860 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 GABRR2P28476 465 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 RBL1P28749 1068 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 RCVRNP35243 200 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 MYBPC1Q00872 1141 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 FAM183BPQ6ZVS7 135 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 SPATA5L1Q9BVQ7 753 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 COG5Q9UP83 839 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 WWP2O00308 870 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 CLDN5O00501 218 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 FFAR3O14843 346 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 GPR42O15529 346 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 BUD23O43709 281 aaKnown RBP11.32□□□□□ -0.6
PTCH1-205ENST00000418258 APODP05090 189 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 LRPAP1P30533 357 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 CRADDP78560 199 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 GCNT1Q02742 428 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 CLEC17AQ6ZS10 378 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 EIF3MQ7L2H7 374 aaKnown RBP11.32□□□□□ -0.6
PTCH1-205ENST00000418258 PHYKPLQ8IUZ5 450 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 C12orf50Q8NA57 414 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-205ENST00000418258 EXOC2Q96KP1 924 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 ALKBH4Q9NXW9 302 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 CLIC5Q9NZA1 410 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 TMEM216Q9P0N5 145 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 ZNF510Q9Y2H8 683 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 SLC15A5A6NIM6 579 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 EIF4BP23588 611 aaKnown RBP11.32□□□□□ -0.6
PTCH1-205ENST00000418258 PARP6Q2NL67 630 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 ZNF354BQ96LW1 612 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 CERS4Q9HA82 394 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 DDX4Q9NQI0 724 aaKnown RBP11.32□□□□□ -0.6
PTCH1-205ENST00000418258 DMGDHQ9UI17 866 aaKnown RBP11.32□□□□□ -0.6
PTCH1-205ENST00000418258 SALL1Q9NSC2 1324 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 CLPTM1O96005 669 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 PCBP1Q15365 356 aaKnown RBP eCLIP11.32□□□□□ -0.6
PTCH1-205ENST00000418258 SDHAF4Q5VUM1 108 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 DCLRE1AQ6PJP8 1040 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 NEK7Q8TDX7 302 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 KLHL25Q9H0H3 589 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 PRKAB1Q9Y478 270 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 MEGF6O75095 1541 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 FRMPD4Q14CM0 1322 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 MGRN1O60291 552 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 CAMK1Q14012 370 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 GALNT3Q14435 633 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 SEC23AQ15436 765 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 AP5B1Q2VPB7 878 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 INTS11Q5TA45 600 aaKnown RBP11.32□□□□□ -0.6
PTCH1-205ENST00000418258 CYP2R1Q6VVX0 501 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 RTL3Q8N8U3 475 aaKnown RBP11.32□□□□□ -0.6
PTCH1-205ENST00000418258 OR52K1Q8NGK4 314 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 KAT5Q92993 513 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 CDADC1Q9BWV3 514 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 CLEC4MQ9H2X3 399 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-205ENST00000418258 TMEM134Q9H6X4 195 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 RABGEF1Q9UJ41 708 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 PCDHGC5Q9Y5F6 944 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 QSOX1O00391 747 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 STX11O75558 287 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 ALAS2P22557 587 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 S100GP29377 79 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 PSRC1Q6PGN9 363 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-205ENST00000418258 AFTPHQ6ULP2 937 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 ASF1AQ9Y294 204 aa11.32□□□□□ -0.6
PTCH1-205ENST00000418258 PHGDHO43175 533 aaKnown RBP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 FGF19O95750 216 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 TRUB2O95900 331 aaKnown RBP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 SF1Q15637 639 aaKnown RBP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 ADRM1Q16186 407 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 APOBEC3HQ6NTF7 200 aaKnown RBP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 KLHL35Q6PF15 583 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 ZFPM1Q8IX07 1006 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 NRSN1Q8IZ57 195 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 RORBQ92753 470 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 APOPT1Q96IL0 206 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 RXFP1Q9HBX9 757 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 SH3GLB1Q9Y371 365 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 PCDHA11Q9Y5I1 949 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 H3BNH8 94 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 CCNIQ14094 377 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 ZCCHC23Q6ZST2 131 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 ZNF563Q8TA94 476 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 SLC9A7Q96T83 725 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 FBXO6Q9NRD1 293 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 IMP3Q9NV31 184 aaKnown RBP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 MAT2BQ9NZL9 334 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 TPRKBQ9Y3C4 175 aa11.31□□□□□ -0.6
PTCH1-205ENST00000418258 DNALI1O14645 258 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-205ENST00000418258 RIPK2O43353 540 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms