RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 GTF3C4Q9UKN8 822 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PHTF1Q9UMS5 762 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TIMELESSQ9UNS1 1208 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SH2B3Q9UQQ2 575 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ATG4BQ9Y4P1 393 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SIRT4Q9Y6E7 314 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 POLEQ07864 2286 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PLXNA3P51805 1871 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CMYA5Q8N3K9 4069 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 LTBP1Q14766 1721 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KDM4EB2RXH2 506 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TRIM49D1C9J1S8 452 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNF587BE7ETH6 402 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLCO1B7G3V0H7 640 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 VWA5AO00534 786 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MRPS12O15235 138 aaKnown RBP-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 IDH3BO43837 385 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SUN1O94901 812 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 IGHG3P01860 377 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 FAM157CP0CG43 387 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 IGFBP3P17936 291 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ACHEP22303 614 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLC6A2P23975 617 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 FPR3P25089 353 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CCNFP41002 786 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 UBA7P41226 1012 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CPT1AP50416 773 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PDX1P52945 283 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SELENOVP59797 346 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 HERVK_113P62684 666 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GPSM2P81274 684 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RPL6Q02878 288 aaKnown RBP-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLFN5Q08AF3 891 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 LSAMPQ13449 338 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GAB1Q13480 694 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PRSS8Q16651 343 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 LINC00483Q53H64 154 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 C5orf47Q569G3 176 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 NOM1Q5C9Z4 860 aaKnown RBP-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 WDR38Q5JTN6 314 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 EFHC1Q5JVL4 640 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MFSD14BQ5SR56 506 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 C6orf10Q5SRN2 563 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 DCAF12L2Q5VW00 463 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MTHFD1LQ6UB35 978 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNF841Q6ZN19 808 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SHISA6Q6ZSJ9 500 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 OLIG3Q7RTU3 272 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNF367Q7RTV3 350 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PXKQ7Z7A4 578 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CCDC103Q8IW40 242 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNF611Q8N823 705 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 Q8NBF4 154 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PIK3C3Q8NEB9 887 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TTC16Q8NEE8 873 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNRF2Q8NHG8 242 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 FLVCR1-AS1Q8TAF5 88 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SNX19Q92543 992 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RPUSD4Q96CM3 377 aaKnown RBP-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CYFIP2Q96F07 1278 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 NSMCE3Q96MG7 304 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PRICKLE1Q96MT3 831 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MSTO1Q9BUK6 570 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 OSBPL6Q9BZF3 934 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GZF1Q9H116 711 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 UPF3AQ9H1J1 476 aaKnown RBP-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 VNN3Q9NY84 501 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 LRWD1Q9UFC0 647 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 DNAI1Q9UI46 699 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SNX14Q9Y5W7 946 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ARHGAP23Q9P227 1491 aa-2.15□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CACNA1BQ00975 2339 aa-2.16□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CEP295Q9C0D2 2601 aa-2.16□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MUC4Q99102 2169 aa-2.16□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLC22A23A1A5C7 686 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ZNF320A2RRD8 509 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ASB14A6NK59 587 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 C9IYK1 514 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 DTNBO60941 627 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ACTL6AO96019 429 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PRM1P04553 51 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 MYBP10242 640 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 FCGR2AP12318 317 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CPN1P15169 458 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 ZNF16P17020 682 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PTPN1P18031 435 aaKnown RBP-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CD247P20963 164 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 JAK1P23458 1154 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 HOXA7P31268 230 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SPRR2AP35326 72 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CRKP46108 304 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PEX5P50542 639 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SUOXP51687 545 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 NUDT6P53370 316 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 PRKAA2P54646 552 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 RAG2P55895 527 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 NOMO3P69849 1222 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 EHHADHQ08426 723 aa-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 CHAF1AQ13111 956 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-1340P-201ENST00000384438 SNTB1Q13884 538 aaKnown RBP-2.16□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms