RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 HMGCLL1Q8TB92 370 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 TCF12Q99081 682 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 UPF3AQ9H1J1 476 aaKnown RBP16.06■□□□□ 0.16
CKAP4-201ENST00000378026 IPO11Q9UI26 975 aaKnown RBP16.06■□□□□ 0.16
CKAP4-201ENST00000378026 ADAM28Q9UKQ2 775 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 CLOCKO15516 846 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 H2AFYO75367 372 aaKnown RBP16.06■□□□□ 0.16
CKAP4-201ENST00000378026 DDHD2O94830 711 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 GSTT2P0CG29 244 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 GSTT2BP0CG30 244 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 ZNF12P17014 697 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 ATP6V1B2P21281 511 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 MERTKQ12866 999 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 STX5Q13190 355 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 C6orf10Q5SRN2 563 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 ANKRD26P1Q6NSI1 321 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 KDM1BQ8NB78 822 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 LPAR1Q92633 364 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 NXNL1Q96CM4 212 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 LRCH3Q96II8 777 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 CDHR1Q96JP9 859 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 PCYT2Q99447 389 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 VTI1BQ9UEU0 232 aa16.06■□□□□ 0.16
CKAP4-201ENST00000378026 ZCWPW2A0A1B0GU75 182 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 B4GAT1O43505 415 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 PEX10O60683 326 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 GABBR2O75899 941 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 MT-ND1P03886 318 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 TSPAN8P19075 237 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 PLK1P53350 603 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 LRP8Q14114 963 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 RWDD4Q6NW29 188 aaKnown RBP16.05■□□□□ 0.16
CKAP4-201ENST00000378026 CNSTQ6PJW8 725 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 LCLAT1Q6UWP7 414 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 TMEM151AQ8N4L1 468 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 HNRNPABQ99729 332 aaKnown RBP16.05■□□□□ 0.16
CKAP4-201ENST00000378026 CDT1Q9H211 546 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 TCRBV3S1A0A5B6 114 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 CFAP99D6REC4 459 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 DLGAP1O14490 977 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 SPTLC1O15269 473 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 HCRTO43612 131 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 NOL3O60936 208 aaKnown RBP16.05■□□□□ 0.16
CKAP4-201ENST00000378026 IDO1P14902 403 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 LRPAP1P30533 357 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 AMHR2Q16671 573 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 SOWAHAQ2M3V2 549 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 XRRA1Q6P2D8 792 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 NT5DC4Q86YG4 428 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 NAT16Q8N8M0 369 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 CXorf38Q8TB03 319 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 CPB2Q96IY4 423 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 NT5C1AQ9BXI3 368 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 RNF19AQ9NV58 838 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 CROTQ9UKG9 612 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 TRIM24O15164 1050 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 E2F6O75461 281 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 CABYRO75952 493 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 ZNF24P17028 368 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 CSE1LP55060 971 aaKnown RBP16.05■□□□□ 0.16
CKAP4-201ENST00000378026 POU5F1BQ06416 359 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 RGS21Q2M5E4 152 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 ZNF362Q5T0B9 420 aaPredicted RBP16.05■□□□□ 0.16
CKAP4-201ENST00000378026 EPHX4Q8IUS5 362 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 ARL10Q8N8L6 244 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 MINDY3Q9H8M7 445 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 ZFYVE28Q9HCC9 887 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 OAZ3Q9UMX2 235 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 V9GYQ6 96 aa16.05■□□□□ 0.16
CKAP4-201ENST00000378026 UBDO15205 165 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 SLC22A2O15244 555 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 TIMM44O43615 452 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 SRP72O76094 671 aaKnown RBP16.04■□□□□ 0.16
CKAP4-201ENST00000378026 PROZP22891 400 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 NMBRP28336 390 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 PERM1Q5SV97 790 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 ZNF280DQ6N043 979 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 SNX29P2Q8IUI4 249 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 SHCBP1Q8NEM2 672 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 BPIFB6Q8NFQ5 453 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 IL22Q9GZX6 179 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 BRD8Q9H0E9 1235 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 TNFRSF12AQ9NP84 129 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 GID8Q9NWU2 228 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 STAG3L1P0CL83 205 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 MATN1P21941 496 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 ADSLP30566 484 aaPredicted RBP16.04■□□□□ 0.16
CKAP4-201ENST00000378026 CTBP1Q13363 440 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 IFNEQ86WN2 208 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 CAMK1DQ8IU85 385 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 NIFKQ9BYG3 293 aaKnown RBP16.04■□□□□ 0.16
CKAP4-201ENST00000378026 FBRSL1Q9HCM7 1045 aaKnown RBP16.04■□□□□ 0.16
CKAP4-201ENST00000378026 SACM1LQ9NTJ5 587 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 MID2Q9UJV3 735 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 CDH7Q9ULB5 785 aa16.04■□□□□ 0.16
CKAP4-201ENST00000378026 SLCO1B7G3V0H7 640 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 MAFO75444 373 aaPredicted RBP16.03■□□□□ 0.16
CKAP4-201ENST00000378026 YWHAQP27348 245 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 ADORA2BP29275 332 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 GJA8P48165 433 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms