RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 OR8D1Q8WZ84 308 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 BTN3A1O00481 513 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 MRASO14807 208 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 POLD2P49005 469 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 SLC6A3Q01959 620 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 PIK3R5Q8WYR1 880 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 NELL1Q92832 810 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 OXNAD1Q96HP4 312 aaPredicted RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 INO80Q9ULG1 1556 aaPredicted RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 CLCN5P51795 746 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 SPIRE1Q08AE8 756 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 ARCQ7LC44 396 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.78□□□□□ -0.841e-6■■■■□ 23.3
CUX1-203ENST00000360264 ZNF638Q14966 1978 aaKnown RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 A0A0A0MRY4 1105 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 RIPK2O43353 540 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 TMCC2O75069 709 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 SYT12Q8IV01 421 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 HELQQ8TDG4 1101 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 SPATA13Q96N96 652 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 CNGB3Q9NQW8 809 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 ENDOD1O94919 500 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 GIMD1P0DJR0 217 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 KLK7P49862 253 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 INHBEP58166 350 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 GRB10Q13322 594 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 ZSWIM7Q19AV6 140 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 KCNT2Q6UVM3 1135 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 GPC2Q8N158 579 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 ZNF606Q8WXB4 792 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 UBAP1Q9NZ09 502 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 MYO3AQ8NEV4 1616 aa9.77□□□□□ -0.84
CUX1-203ENST00000360264 OTCP00480 354 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 SNRPB2P08579 225 aaKnown RBP9.77□□□□□ -0.85
CUX1-203ENST00000360264 IRF8Q02556 426 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 LRRC38Q5VT99 294 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 ARMC8Q8IUR7 673 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 TCP10LQ8TDR4 215 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 HASPINQ8TF76 798 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 DSN1Q9H410 356 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 DMGDHQ9UI17 866 aaKnown RBP9.77□□□□□ -0.85
CUX1-203ENST00000360264 BTBD3Q9Y2F9 522 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 ACTR3P61158 418 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 RPP38P78345 283 aaKnown RBP9.77□□□□□ -0.85
CUX1-203ENST00000360264 TRIP11Q15643 1979 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 ZNF276Q8N554 614 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 KBTBD8Q8NFY9 601 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 KAT5Q92993 513 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 PTPRUQ92729 1446 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 YBX3P16989 372 aaKnown RBP eCLIP9.77□□□□□ -0.855e-6■■■□□ 19.1
CUX1-203ENST00000360264 PPATQ06203 517 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 CBX2Q14781 532 aaPredicted RBP9.77□□□□□ -0.85
CUX1-203ENST00000360264 REM2Q8IYK8 340 aaPredicted RBP9.77□□□□□ -0.85
CUX1-203ENST00000360264 PIF1Q9H611 641 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 LYVE1Q9Y5Y7 322 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 CCDC88AQ3V6T2 1871 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 NOS2P35228 1153 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 RPL19P84098 196 aaKnown RBP9.77□□□□□ -0.85
CUX1-203ENST00000360264 PAPD7Q5XG87 772 aaKnown RBP9.77□□□□□ -0.85
CUX1-203ENST00000360264 EPB41L4AQ9HCS5 686 aaPredicted RBP9.77□□□□□ -0.85
CUX1-203ENST00000360264 SCAF8Q9UPN6 1271 aaKnown RBP9.77□□□□□ -0.85
CUX1-203ENST00000360264 KCNE2Q9Y6J6 123 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 TTC3P53804 2025 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 RGS20O76081 388 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 PRG2P13727 222 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 MBTD1Q05BQ5 628 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 ADAMTSL2Q86TH1 951 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 TKTL2Q9H0I9 626 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 GPRC5CQ9NQ84 441 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 ZNF407Q9C0G0 2248 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 SALL1Q9NSC2 1324 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 CHP2O43745 196 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 JAZF1Q86VZ6 243 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 MARCH10Q8NA82 808 aaPredicted RBP9.77□□□□□ -0.85
CUX1-203ENST00000360264 OR2W6PQ8NHA6 318 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 PTCD3Q96EY7 689 aaKnown RBP9.77□□□□□ -0.85
CUX1-203ENST00000360264 ZNF558Q96NG5 402 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 PHF11Q9UIL8 331 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 TEX46H3BTG2 121 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 LPIN1Q14693 890 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 TTI2Q6NXR4 508 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 ACER1Q8TDN7 264 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 MCRS1Q96EZ8 462 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 SEPHS2Q99611 448 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 MADDQ8WXG6 1647 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 LINC00854A0A1B0GVQ3 168 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 SLC37A4O43826 429 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 SEMA3DO95025 777 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 AP2M1Q96CW1 435 aa9.77□□□□□ -0.85
CUX1-203ENST00000360264 OR6C75A6NL08 312 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 BDNFP23560 247 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 PSEN2P49810 448 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ATN1P54259 1190 aaPredicted RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 MYBPC1Q00872 1141 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ELP6Q0PNE2 266 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 NR1D2Q14995 579 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 ATXN7L2Q5T6C5 722 aaPredicted RBP9.76□□□□□ -0.85
CUX1-203ENST00000360264 SLC2A14Q8TDB8 520 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 WDR60Q8WVS4 1066 aa9.76□□□□□ -0.85
CUX1-203ENST00000360264 GAKO14976 1311 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms