RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SERPINA6P08185 405 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 ATF2P15336 505 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 RFC2P35250 354 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 HCAR3P49019 387 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 PPP1R3AQ16821 1122 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 MGAT5BQ3V5L5 792 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 PIAS4Q8N2W9 510 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 UBL4BQ8N7F7 174 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 PCSK9Q8NBP7 692 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 TTLQ8NG68 377 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 OMA1Q96E52 524 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 FAM111AQ96PZ2 611 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 TSG101Q99816 390 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 HEMGNQ9BXL5 484 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 OR2B2Q9GZK3 357 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 ATP13A3Q9H7F0 1226 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 MAGEF1Q9HAY2 307 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 SIX2Q9NPC8 291 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 RIMKLBQ9ULI2 386 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 AP4S1Q9Y587 144 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 ATG2AQ2TAZ0 1938 aa9.44□□□□□ -0.9
SMARCAL1-202ENST00000358207 A0A087WXM4 84 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 A0A1W2PQ45 241 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 A0A1W2PQY0 241 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 ASB14A6NK59 587 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 SDR42E2A6NKP2 422 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 CLDN25C9JDP6 229 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 LINC01387J3KSC0 135 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 TM9SF1O15321 606 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 DYRK3O43781 588 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 CLTBP09497 229 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 ITIH1P19827 911 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 MATN1P21941 496 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 DLG2Q15700 870 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 KRT80Q6KB66 452 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 PIWIL3Q7Z3Z3 882 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 ANKS1BQ7Z6G8 1248 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 CHSY1Q86X52 802 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 CCDC33Q8N5R6 958 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 OR5H6Q8NGV6 325 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 OR2T3Q8NH03 318 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF597Q96LX8 424 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 CBWD1Q9BRT8 395 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 C20orf27Q9GZN8 174 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 RSPH9Q9H1X1 276 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 COQ10BQ9H8M1 238 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 TUFT1Q9NNX1 390 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 TBC1D22BQ9NU19 505 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 SEPT3Q9UH03 358 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 STRIP2Q9ULQ0 834 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF839A8K0R7 811 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 MIF4GDA9UHW6 222 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 SLC9A3R1O14745 358 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 KPNA6O60684 536 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 USP12O75317 370 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 BCL10O95999 233 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 PRLP01236 227 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 IL1BP01584 269 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 PFKMP08237 780 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 TXNP10599 105 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 ADCYAP1R1P41586 468 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 GRIA1P42261 906 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 OR3A3P47888 321 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 PPP2R5DQ14738 602 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 TMEM126BQ8IUX1 230 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 FAM47BQ8NA70 645 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 SLC4A11Q8NBS3 891 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 BBOF1Q8ND07 529 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 TFB1MQ8WVM0 346 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 CD101Q93033 1021 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 VPS33AQ96AX1 596 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 GUCD1Q96NT3 240 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 CSF3RQ99062 836 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 C1QTNF7Q9BXJ2 289 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 MKRN2Q9H000 416 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 WWP1Q9H0M0 922 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 PLSCR3Q9NRY6 295 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 ADPRHL2Q9NX46 363 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 MAP3K20Q9NYL2 800 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 COQ3Q9NZJ6 369 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 CDH23Q9H251 3354 aa9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 MYH9P35579 1960 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-202ENST00000358207 A0A0B4J269 797 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 ASNA1O43681 348 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 RNASEH2AO75792 299 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 NADKO95544 446 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 ZNF286BP0CG31 522 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 CCNA2P20248 432 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 CASP3P42574 277 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 SLC9A3P48764 834 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 COPAP53621 1224 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 MAP3K7CLP57077 242 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 PSMC5P62195 406 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 TNK2Q07912 1038 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 TUBB3Q13509 450 aa9.42□□□□□ -0.9
SMARCAL1-202ENST00000358207 KNOP1Q1ED39 458 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms