RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 UBQLN1Q9UMX0 589 aaKnown RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 PLA2R1Q13018 1463 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 C2orf71A6NGG8 1288 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 SLC28A1O00337 649 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 GNB5O14775 395 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 HSPA14Q0VDF9 509 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 FAM98BQ52LJ0 330 aaKnown RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 C1orf94Q6P1W5 598 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 CES3Q6UWW8 571 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 KCT2Q8NC54 265 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 ARNTL2Q8WYA1 636 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 ING5Q8WYH8 240 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 HAVCR1Q96D42 359 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 KCNQ5Q9NR82 932 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 NEDD8-MDP1E9PL57 170 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 DDX3XO00571 662 aaKnown RBP eCLIP9.86□□□□□ -0.83
CHD3-202ENST00000358181 PHF2O75151 1096 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 MPP3Q13368 585 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 TLR1Q15399 786 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 FIBCD1Q8N539 461 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 KAT2AQ92830 837 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 CDK5RAP1Q96SZ6 601 aaKnown RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 PRMT7Q9NVM4 692 aaPredicted RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 TMEM51Q9NW97 253 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 CKLFQ9UBR5 152 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 HIF3AQ9Y2N7 669 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 ARHGAP31Q2M1Z3 1444 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 FAM172BPA6NC97 362 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 A8MUA0 341 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 ARHGEF33A8MVX0 844 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 GABBR2O75899 941 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 AHCYP23526 432 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 RFC5P40937 340 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 BEX3Q00994 111 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 EPHA7Q15375 998 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 TOR1AIP1Q5JTV8 583 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 TRIM40Q6P9F5 258 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 NMD3Q96D46 503 aaKnown RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 RNF145Q96MT1 663 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 RSAD1Q9HA92 442 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 UXTQ9UBK9 157 aaPredicted RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 AP1M2Q9Y6Q5 423 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 H3BSH0 61 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 PDHXO00330 501 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 EYA4O95677 639 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 PGK1P00558 417 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 CSN2P05814 226 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 MAGEA4P43358 317 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 CASP6P55212 293 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 SCN1BQ07699 218 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 MAPK14Q16539 360 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 ACAD10Q6JQN1 1059 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 LRRC6Q86X45 466 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 HIPK1Q86Z02 1210 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 OR4A15Q8NGL6 344 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 FAM210AQ96ND0 272 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 JMJD4Q9H9V9 463 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 PNO1Q9NRX1 252 aaKnown RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 CROTQ9UKG9 612 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.85□□□□□ -0.83
CHD3-202ENST00000358181 TRPM1Q7Z4N2 1603 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 GPR89AB7ZAQ6 455 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 FFAR3O14843 346 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 GPR42O15529 346 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 SLC37A4O43826 429 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 DGAT1O75907 488 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 DDNO94850 711 aaPredicted RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 FAM58BPP0C7Q3 252 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 GPR89BP0CG08 455 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 SF1Q15637 639 aaKnown RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 PAGE2BQ5JRK9 111 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 OVOS1Q6IE37 1185 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 BNC2Q6ZN30 1099 aaPredicted RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 SLC22A15Q8IZD6 547 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 SPATA20Q8TB22 786 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 FBXO30Q8TB52 745 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 MARK4Q96L34 752 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 MCMBPQ9BTE3 642 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 DHRS7Q9Y394 339 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 HEMK1Q9Y5R4 338 aaPredicted RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 RAD54BQ9Y620 910 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 EPHB6O15197 1021 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 GCATO75600 419 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 FDFT1P37268 417 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 LSM3P62310 102 aaKnown RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 ARMC12Q5T9G4 340 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 TAF2Q6P1X5 1199 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 BARGINQ6ZT62 677 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 GTF3C2Q8WUA4 911 aaPredicted RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 TCEAL3Q969E4 200 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 MFSD3Q96ES6 412 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 HGH1Q9BTY7 390 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 TARS2Q9BW92 718 aaKnown RBP9.85□□□□□ -0.83
CHD3-202ENST00000358181 DPEP2Q9H4A9 486 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 TLE6Q9H808 572 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 RBM22Q9NW64 420 aaKnown RBP eCLIP9.85□□□□□ -0.831e-5■■■■□ 22.7
CHD3-202ENST00000358181 APEX2Q9UBZ4 518 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 ADGRG1Q9Y653 693 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 ZSCAN5BA6NJL1 495 aa9.85□□□□□ -0.83
CHD3-202ENST00000358181 TNFAIP8O95379 198 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms