RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TP53INP2Q8IXH6 220 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 ACVR1CQ8NER5 493 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 ZFP28Q8NHY6 868 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 KCTD4Q8WVF5 259 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 KLHL32Q96NJ5 620 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 CNGB3Q9NQW8 809 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 XPR1Q9UBH6 696 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 GJD2Q9UKL4 321 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 ZNF638Q14966 1978 aaKnown RBP17.93■□□□□ 0.46
RTN4-204ENST00000357732 FAM72CH0Y354 149 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 AMHP03971 560 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 ADCYAP1R1P41586 468 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 GALNT1Q10472 559 aaPredicted RBP17.93■□□□□ 0.46
RTN4-204ENST00000357732 PPIL2Q13356 520 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 SQLEQ14534 574 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 PPP2R5DQ14738 602 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 MYLK3Q32MK0 819 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 FAM72AQ5TYM5 149 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 FAM72DQ6L9T8 149 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 CLEC20AQ6ZU45 233 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 FAM72BQ86X60 149 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 ANKRD13AQ8IZ07 590 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 GPR78Q96P69 363 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 UHRF1Q96T88 793 aaPredicted RBP17.93■□□□□ 0.46
RTN4-204ENST00000357732 GRIP2Q9C0E4 1043 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 AP4S1Q9Y587 144 aa17.93■□□□□ 0.46
RTN4-204ENST00000357732 SYNJ2BP-COX16A0A087WUM0 186 aa17.92■□□□□ 0.46
RTN4-204ENST00000357732 SDHDO14521 159 aa17.92■□□□□ 0.46
RTN4-204ENST00000357732 ATP5F1P24539 256 aaPredicted RBP17.92■□□□□ 0.46
RTN4-204ENST00000357732 PSME3P61289 254 aa17.92■□□□□ 0.46
RTN4-204ENST00000357732 HACD2Q6Y1H2 254 aa17.92■□□□□ 0.46
RTN4-204ENST00000357732 NPWQ8N729 165 aa17.92■□□□□ 0.46
RTN4-204ENST00000357732 USP13Q92995 863 aaPredicted RBP17.92■□□□□ 0.46
RTN4-204ENST00000357732 EME1Q96AY2 570 aa17.92■□□□□ 0.46
RTN4-204ENST00000357732 EFHD1Q9BUP0 239 aa17.92■□□□□ 0.46
RTN4-204ENST00000357732 FTHL17Q9BXU8 183 aa17.92■□□□□ 0.46
RTN4-204ENST00000357732 EML4Q9HC35 981 aaKnown RBP17.92■□□□□ 0.46
RTN4-204ENST00000357732 COX16Q9P0S2 106 aa17.92■□□□□ 0.46
RTN4-204ENST00000357732 PACSIN3Q9UKS6 424 aa17.92■□□□□ 0.46
RTN4-204ENST00000357732 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.91■□□□□ 0.46
RTN4-204ENST00000357732 PHGDHO43175 533 aaKnown RBP17.91■□□□□ 0.46
RTN4-204ENST00000357732 AHSGP02765 367 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 ZNF23P17027 643 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 PTPN1P18031 435 aaKnown RBP17.91■□□□□ 0.46
RTN4-204ENST00000357732 ABCG1P45844 678 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 DAOAP59103 153 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 TMEM198Q66K66 360 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 POTEHQ6S545 545 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 NDRG1Q92597 394 aaKnown RBP17.91■□□□□ 0.46
RTN4-204ENST00000357732 PGLYRP2Q96PD5 576 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 NXF3Q9H4D5 531 aaKnown RBP17.91■□□□□ 0.46
RTN4-204ENST00000357732 IPO11Q9UI26 975 aaKnown RBP17.91■□□□□ 0.46
RTN4-204ENST00000357732 APPL1Q9UKG1 709 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 PCDHGA7Q9Y5G6 932 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 GPR32O75388 356 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 RNASEH2AO75792 299 aaKnown RBP17.91■□□□□ 0.46
RTN4-204ENST00000357732 ANXA9O76027 345 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 FYNP06241 537 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 FAM200BP0CF97 657 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 PAMP19021 973 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 TUBA4AP68366 448 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 CDKL1Q00532 357 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 POU4F1Q01851 419 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 MGAT5BQ3V5L5 792 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 C6orf52Q5T4I8 152 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 FASTKD5Q7L8L6 764 aaKnown RBP17.91■□□□□ 0.46
RTN4-204ENST00000357732 ZSCAN18Q8TBC5 510 aaPredicted RBP17.91■□□□□ 0.46
RTN4-204ENST00000357732 GTF3C2Q8WUA4 911 aaPredicted RBP17.91■□□□□ 0.46
RTN4-204ENST00000357732 TMA16Q96EY4 203 aaKnown RBP17.91■□□□□ 0.46
RTN4-204ENST00000357732 ZCWPW1Q9H0M4 648 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 AK5Q9Y6K8 562 aa17.91■□□□□ 0.46
RTN4-204ENST00000357732 FAM95CA0A1B0GW59 222 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 CCDC160A6NGH7 325 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 SPATA31D3P0C874 917 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 CD1EP15812 388 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 ZNF618Q5T7W0 954 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 SPATA31D4Q6ZUB0 917 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 PAQR9Q6ZVX9 377 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 ZNF467Q7Z7K2 595 aaPredicted RBP17.9■□□□□ 0.46
RTN4-204ENST00000357732 PPHLN1Q8NEY8 458 aaKnown RBP17.9■□□□□ 0.46
RTN4-204ENST00000357732 MEAF6Q9HAF1 191 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 ADARB2Q9NS39 739 aaKnown RBP17.9■□□□□ 0.46
RTN4-204ENST00000357732 HEATR9A2RTY3 570 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 FAM155AB1AL88 458 aaPredicted RBP17.9■□□□□ 0.46
RTN4-204ENST00000357732 GABRDO14764 452 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 TRIM24O15164 1050 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 DARSP14868 501 aaKnown RBP17.9■□□□□ 0.46
RTN4-204ENST00000357732 ATP6V1B1P15313 513 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 GABRB3P28472 473 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 SLC7A1P30825 629 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 CYP2C18P33260 490 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 GLRBP48167 497 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 INHBCP55103 352 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 LILRA4P59901 499 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 FAM45BPQ6NSW5 357 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 DCLRE1AQ6PJP8 1040 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 KIAA0408Q6ZU52 694 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 OSTM1Q86WC4 334 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 SLC41A1Q8IVJ1 513 aa17.9■□□□□ 0.46
RTN4-204ENST00000357732 RNF169Q8NCN4 708 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms