RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 NOMO2Q5JPE7 1267 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SLC30A10Q6XR72 485 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 FAM124AQ86V42 546 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 HELQQ8TDG4 1101 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 C18orf25Q96B23 403 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 CHP1Q99653 195 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SPATA9Q9BWV2 254 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 BTBD7Q9P203 1132 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ITGB1BP2Q9UKP3 347 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 FRMPD4Q14CM0 1322 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 A0A0B4J269 797 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 PDE9AO76083 593 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 TOP3BO95985 862 aaKnown RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 IL1BP01584 269 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 OGNP20774 298 aaKnown RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 TOB1P50616 345 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 NAIF1Q69YI7 327 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 TTI2Q6NXR4 508 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ZPBP2Q6X784 338 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 UNC93AQ86WB7 457 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 RASAL3Q86YV0 1011 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 SH2D3CQ8N5H7 860 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 Q96MT0 163 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 TMEM121Q9BTD3 319 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 CDH9Q9ULB4 789 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 SPATA2Q9UM82 520 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 PCDHA3Q9Y5H8 950 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ZSCAN5CA6NGD5 496 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 SMNDC1O75940 238 aaKnown RBP eCLIP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 MAP3K6O95382 1288 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 PRKAR2AP13861 404 aaKnown RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ATP6V1B1P15313 513 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 GP5P40197 560 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 TTPAP49638 278 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 NOGQ13253 232 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 FASTKQ14296 549 aaKnown RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ZBTB49Q6ZSB9 765 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 BEND7Q8N7W2 519 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 INPP4AQ96PE3 977 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 RPS6KA6Q9UK32 745 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ERVW-1Q9UQF0 538 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 DDNO94850 711 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 BGNP21810 368 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 RCVRNP35243 200 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 HSD17B3P37058 310 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 KCNJ1P48048 391 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 GLUD2P49448 558 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ACTR3P61158 418 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 FKBP1AP62942 108 aaKnown RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF844Q08AG5 666 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 SLC29A2Q14542 456 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 PARP6Q2NL67 630 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 WDR59Q6PJI9 974 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 BNIPLQ7Z465 357 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 JAZF1Q86VZ6 243 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 EMC1Q8N766 993 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 RP9Q8TA86 221 aaKnown RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 CATSPER2Q96P56 530 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 SLC25A23Q9BV35 468 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 RTFDC1Q9BY42 306 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 RHOBTB2Q9BYZ6 727 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF624Q9P2J8 865 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 PREX1Q8TCU6 1659 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 UBE2QL1A1L167 161 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 CD44P16070 742 aaKnown RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 NFKB1P19838 968 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 UGT1A5P35504 534 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 SLC1A6P48664 564 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 DRG2P55039 364 aaKnown RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 BMPR2Q13873 1038 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ACAP2Q15057 778 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 TSC22D1Q15714 1073 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 IRGCQ6NXR0 463 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF621Q6ZSS3 439 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 DET1Q7L5Y6 550 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ZNF720Q7Z2F6 126 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 CENPIQ92674 756 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 FERD3LQ96RJ6 166 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 POP1Q99575 1024 aaKnown RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 TKTL2Q9H0I9 626 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 REEP1Q9H902 201 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 SLC28A3Q9HAS3 691 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 CROTQ9UKG9 612 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 SLC12A4Q9UP95 1085 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 HMGCRP04035 888 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 RARGP13631 454 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 PRG2P13727 222 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 BDNFP23560 247 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ADCYAP1R1P41586 468 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ARHGDIBP52566 201 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 GCNT1Q02742 428 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 ZSWIM7Q19AV6 140 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 GPAT3Q53EU6 434 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 EIF3MQ7L2H7 374 aaKnown RBP5.59□□□□□ -1.51
PTPRD-202ENST00000356435 LRRC49Q8IUZ0 686 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 DENND1CQ8IV53 801 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 RASGEF1AQ8N9B8 481 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 TSPAN14Q8NG11 270 aa5.59□□□□□ -1.51
PTPRD-202ENST00000356435 TAS1R2Q8TE23 839 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms